• DocumentCode
    414284
  • Title

    Automation of yeast pedigree analysis

  • Author

    Koschwanez, John ; Holl, M. ; McMurray, Michael ; Gottschling, Daniel ; Meldrum, Deirdre

  • Author_Institution
    Dept. of Electr. Eng., Washington Univ., Seattle, WA, USA
  • Volume
    2
  • fYear
    2004
  • fDate
    April 26-May 1, 2004
  • Firstpage
    1475
  • Abstract
    Yeast pedigree analysis-isolation and characterization of the products of mitotic cell divisions throughout the lifespan of an individual cell-is a manually intensive process that requires a biologist to manipulate single yeast cells every 90 minutes for as long as 150 hours. Progress toward the development of a system for automating yeast pedigree analysis is presented. Yeast cells are trapped in a microfluidic device, then observed using a fiber-optic imaging bundle. Image processing software classifies each cell as either budding or not budding a newly formed daughter cell. The system recognizes when a cell has a bud, and microfluidic valves direct newly formed daughter cells to an agar plate. Finally, biologists analyze the colonies formed by each yeast daughter cell on the agar plate.
  • Keywords
    biological techniques; biomedical optical imaging; cellular biophysics; image processing; microfluidics; microorganisms; microvalves; 150 hour; 90 min; agar plate; automation; biologists; budding; colonies; fiber optic imaging; image processing software; microfluidic device; microfluidic valves; mitotic cell divisions; yeast cell isolation; yeast daughter cell; yeast pedigree analysis; Automation; Bioinformatics; Biology; Cancer; Cells (biology); Fungi; Genomics; Microfluidics; Optical fiber devices; Performance analysis;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Robotics and Automation, 2004. Proceedings. ICRA '04. 2004 IEEE International Conference on
  • ISSN
    1050-4729
  • Print_ISBN
    0-7803-8232-3
  • Type

    conf

  • DOI
    10.1109/ROBOT.2004.1308032
  • Filename
    1308032