DocumentCode
414284
Title
Automation of yeast pedigree analysis
Author
Koschwanez, John ; Holl, M. ; McMurray, Michael ; Gottschling, Daniel ; Meldrum, Deirdre
Author_Institution
Dept. of Electr. Eng., Washington Univ., Seattle, WA, USA
Volume
2
fYear
2004
fDate
April 26-May 1, 2004
Firstpage
1475
Abstract
Yeast pedigree analysis-isolation and characterization of the products of mitotic cell divisions throughout the lifespan of an individual cell-is a manually intensive process that requires a biologist to manipulate single yeast cells every 90 minutes for as long as 150 hours. Progress toward the development of a system for automating yeast pedigree analysis is presented. Yeast cells are trapped in a microfluidic device, then observed using a fiber-optic imaging bundle. Image processing software classifies each cell as either budding or not budding a newly formed daughter cell. The system recognizes when a cell has a bud, and microfluidic valves direct newly formed daughter cells to an agar plate. Finally, biologists analyze the colonies formed by each yeast daughter cell on the agar plate.
Keywords
biological techniques; biomedical optical imaging; cellular biophysics; image processing; microfluidics; microorganisms; microvalves; 150 hour; 90 min; agar plate; automation; biologists; budding; colonies; fiber optic imaging; image processing software; microfluidic device; microfluidic valves; mitotic cell divisions; yeast cell isolation; yeast daughter cell; yeast pedigree analysis; Automation; Bioinformatics; Biology; Cancer; Cells (biology); Fungi; Genomics; Microfluidics; Optical fiber devices; Performance analysis;
fLanguage
English
Publisher
ieee
Conference_Titel
Robotics and Automation, 2004. Proceedings. ICRA '04. 2004 IEEE International Conference on
ISSN
1050-4729
Print_ISBN
0-7803-8232-3
Type
conf
DOI
10.1109/ROBOT.2004.1308032
Filename
1308032
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