Title :
Evaluation of protein crystallization states based on texture information
Author :
Saitoh, Kanako ; Kawabata, Kuniald ; Kunimitsu, Satoshi ; Asama, Hajime ; Mishima, Taketoshi
Author_Institution :
Dept. of Information & Comput. Sci., Saitama Univ., Japan
fDate :
28 Sept.-2 Oct. 2004
Abstract :
In recent years, several projects have advanced the research and development related to the automation of the protein crystallization process. However, the evaluation of crystallization states has not been completely automated yet. In the usual crystallization process, the researchers evaluate the crystallization growth states of the protein solution samples based on one´s visual impressions and assign them a score over and over again. Then it is required to make the work more efficient. The method presented here automates such evaluations. This method attempts to categorize the individual crystallization droplet images into five classes from A to E, based on their crystallization states. The algorithm is comprised of pre-processing, feature extraction from images using texture analysis and a categorization process utilizing linear discriminant analysis. The performance of this method has been tested on our experiments using actual protein solution images.
Keywords :
crystal growth from solution; crystallisation; feature extraction; image classification; image texture; proteins; crystallization growth states; feature extraction; individual crystallization droplet images; linear discriminant analysis; protein crystallization state evaluation; protein solution images; protein solution samples; texture analysis; texture information; Algorithm design and analysis; Automation; Crystallization; Feature extraction; Image analysis; Image texture analysis; Linear discriminant analysis; Protein engineering; Research and development; Testing;
Conference_Titel :
Intelligent Robots and Systems, 2004. (IROS 2004). Proceedings. 2004 IEEE/RSJ International Conference on
Print_ISBN :
0-7803-8463-6
DOI :
10.1109/IROS.2004.1389821