• DocumentCode
    445587
  • Title

    Inference of genetic networks using neural network models

  • Author

    Kimura, Shuhei ; Sonoda, Katsuki ; Yamane, Soichiro ; Matsumura, Koki ; Hatakeyama, Mariko

  • Author_Institution
    Fac. of Eng., Tottori Univ., Japan
  • Volume
    2
  • fYear
    2005
  • fDate
    2-5 Sept. 2005
  • Firstpage
    1738
  • Abstract
    We propose a new method for the inference of the genetic networks. The proposed method uses a neural network model to describe the genetic network. The inference of the neural network model of the genetic network is defined as the function optimization problem. As the function optimizer for this problem, a genetic local search is used. At this time, to enhance the probability of finding a reasonable solution, we introduce a priori knowledge about the genetic network into the objective function. In this paper, we also propose the method based on the sensitivity analysis to interpret the optimized neural network model. Through artificial genetic network inference problems, we verify the effectiveness of the proposed method.
  • Keywords
    genetic algorithms; genetics; inference mechanisms; neural nets; search problems; function optimization; genetic local search; genetic network inference; neural network models; sensitivity analysis; Artificial neural networks; Bioinformatics; Differential equations; Function approximation; Gene expression; Genetic engineering; Genomics; Neural networks; Optimization methods; Sensitivity analysis;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Evolutionary Computation, 2005. The 2005 IEEE Congress on
  • Print_ISBN
    0-7803-9363-5
  • Type

    conf

  • DOI
    10.1109/CEC.2005.1554898
  • Filename
    1554898