• DocumentCode
    447575
  • Title

    A scale-space filter approach to clustering dose-response curves of novel drug compounds

  • Author

    Dalai, S.S. ; Balaban, David J.

  • Author_Institution
    Syst. Informatics Group, Amgen, Inc., Thousand Oaks, CA, USA
  • Volume
    3
  • fYear
    2005
  • fDate
    10-12 Oct. 2005
  • Firstpage
    2844
  • Abstract
    Automated dose-response curve classification methods need to be developed to keep up with the vast amount of data emanating from high throughput screening assays. We have devised a methodology based on scale-space filtering that allows tracking of salient features of dose-response curves at different scales. A complete and unbiased representation of dose-response data at various scale levels enables us to subsequently employ metrics that robustly classify the different functional categories of drug compounds that may exist in a novel screening assay. This powerful tool is intuitive and yet rigorous in that it distinguishes "important" characteristics of "different" curves. The method is non-heuristic, eliminates subjectivity, and is general enough to be readily employed in a wide variety of applications.
  • Keywords
    curve fitting; drugs; filtering theory; pattern classification; pharmaceutical industry; automated dose-response curve classification method; novel drug compounds; scale-space filter approach; screening assay; Drugs; Filtering; Filters; High temperature superconductors; Informatics; Matrix converters; Performance analysis; Robustness; Smoothing methods; Throughput; Automatic classification; Clustering; Functional high throughput screening; Gaussian smoothing; Multiscale representation; Scale-space filtering;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Systems, Man and Cybernetics, 2005 IEEE International Conference on
  • Print_ISBN
    0-7803-9298-1
  • Type

    conf

  • DOI
    10.1109/ICSMC.2005.1571581
  • Filename
    1571581