DocumentCode
471519
Title
A Non-Parametric Bayesian Approach to Spike Sorting
Author
Wood, Frank ; Goldwater, Sharon ; Black, Michael J.
Author_Institution
Dept. of Comput. Sci., Brown Univ., Providence, RI
fYear
2006
fDate
Aug. 30 2006-Sept. 3 2006
Firstpage
1165
Lastpage
1168
Abstract
In this work we present and apply infinite Gaussian mixture modeling, a non-parametric Bayesian method, to the problem of spike sorting. As this approach is Bayesian, it allows us to integrate prior knowledge about the problem in a principled way. Because it is non-parametric we are able to avoid model selection, a difficult problem that most current spike sorting methods do not address. We compare this approach to using penalized log likelihood to select the best from multiple finite mixture models trained by expectation maximization. We show favorable offline sorting results on real data and discuss ways to extend our model to online applications
Keywords
Bayes methods; Gaussian processes; Markov processes; Monte Carlo methods; bioelectric phenomena; expectation-maximisation algorithm; neurophysiology; nonparametric statistics; Bayesian inference; Chinese restaurant process; Gibbs sampling; Markov chain; Monte Carlo method; expectation maximization; infinite Gaussian mixture modeling; multiple finite mixture models; neurophysiological recording; nonparametric Bayesian approach; offline sorting; online applications; penalized log likelihood; spike sorting; Bayesian methods; Cities and towns; Computer science; Neurons; Principal component analysis; Robustness; Sampling methods; Sorting; USA Councils; Voltage; Bayesian inference; Chinese restaurant process; Gibbs sampling; Markov chain Monte Carlo; Spike sorting; expectation maximization; infinite mixture model; mixture modeling; non-parametric Bayesian modeling;
fLanguage
English
Publisher
ieee
Conference_Titel
Engineering in Medicine and Biology Society, 2006. EMBS '06. 28th Annual International Conference of the IEEE
Conference_Location
New York, NY
ISSN
1557-170X
Print_ISBN
1-4244-0032-5
Electronic_ISBN
1557-170X
Type
conf
DOI
10.1109/IEMBS.2006.260700
Filename
4461964
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