• DocumentCode
    471519
  • Title

    A Non-Parametric Bayesian Approach to Spike Sorting

  • Author

    Wood, Frank ; Goldwater, Sharon ; Black, Michael J.

  • Author_Institution
    Dept. of Comput. Sci., Brown Univ., Providence, RI
  • fYear
    2006
  • fDate
    Aug. 30 2006-Sept. 3 2006
  • Firstpage
    1165
  • Lastpage
    1168
  • Abstract
    In this work we present and apply infinite Gaussian mixture modeling, a non-parametric Bayesian method, to the problem of spike sorting. As this approach is Bayesian, it allows us to integrate prior knowledge about the problem in a principled way. Because it is non-parametric we are able to avoid model selection, a difficult problem that most current spike sorting methods do not address. We compare this approach to using penalized log likelihood to select the best from multiple finite mixture models trained by expectation maximization. We show favorable offline sorting results on real data and discuss ways to extend our model to online applications
  • Keywords
    Bayes methods; Gaussian processes; Markov processes; Monte Carlo methods; bioelectric phenomena; expectation-maximisation algorithm; neurophysiology; nonparametric statistics; Bayesian inference; Chinese restaurant process; Gibbs sampling; Markov chain; Monte Carlo method; expectation maximization; infinite Gaussian mixture modeling; multiple finite mixture models; neurophysiological recording; nonparametric Bayesian approach; offline sorting; online applications; penalized log likelihood; spike sorting; Bayesian methods; Cities and towns; Computer science; Neurons; Principal component analysis; Robustness; Sampling methods; Sorting; USA Councils; Voltage; Bayesian inference; Chinese restaurant process; Gibbs sampling; Markov chain Monte Carlo; Spike sorting; expectation maximization; infinite mixture model; mixture modeling; non-parametric Bayesian modeling;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Engineering in Medicine and Biology Society, 2006. EMBS '06. 28th Annual International Conference of the IEEE
  • Conference_Location
    New York, NY
  • ISSN
    1557-170X
  • Print_ISBN
    1-4244-0032-5
  • Electronic_ISBN
    1557-170X
  • Type

    conf

  • DOI
    10.1109/IEMBS.2006.260700
  • Filename
    4461964