Title :
Toward a Curated CellML Model Repository
Author :
Nickerson, David ; Stevens, Carey ; Halstead, Matt ; Hunter, Peter ; Nielsen, Poul
Author_Institution :
Bioeng. Inst., Auckland Univ.
fDate :
Aug. 30 2006-Sept. 3 2006
Abstract :
With the development of standards for the description of experimental data and mathematical models of physiological processes has come the advent of publicly accessible repositories of such descriptions. To make these repositories acceptable to the community, the descriptions contained therein must be curated to provide an indication of how accurately the standard description represents the actual experimental data or mathematical model. We define here a curation method for CellML encoded models and propose a model repository workflow using such curation within the CellML model repository
Keywords :
XML; biology computing; cellular biophysics; physiological models; cellML encoded model; curated cellML model repository; mathematical model; Biological information theory; Biological system modeling; Biomedical engineering; Cities and towns; Mathematical model; Ontologies; Software standards; Standards development; Testing; USA Councils;
Conference_Titel :
Engineering in Medicine and Biology Society, 2006. EMBS '06. 28th Annual International Conference of the IEEE
Conference_Location :
New York, NY
Print_ISBN :
1-4244-0032-5
Electronic_ISBN :
1557-170X
DOI :
10.1109/IEMBS.2006.260202