Title :
An Ensemble Approach for Phenotype Classification Based on Fuzzy Partitioning of Gene Expression Data
Author :
Dragomir, A. ; Maraziotis, I. ; Bezerianos, A.
Author_Institution :
Dept. of Med. Phys., Patras Univ.
fDate :
Aug. 30 2006-Sept. 3 2006
Abstract :
We focus on developing a pattern recognition method suitable for performing supervised analysis tasks on molecular data resulting from microarray experiments. Molecular characterization of tissue samples using microarray gene expression profiling is expected to uncover fundamental aspects related to cancer diagnosis and drug discovery. There is therefore a need for reliable, accurate classification methods. With this study we propose a framework for constructing an ensemble of individually trained SVM classifiers, each of them specialized on subsets of the input space. The fuzzy approach used for partitioning the data produces overlapping subsets of the input space that facilitates subsequent classification tasks
Keywords :
biological tissues; biology computing; data analysis; fuzzy set theory; learning (artificial intelligence); molecular biophysics; pattern classification; support vector machines; SVM classifiers; cancer diagnosis; drug discovery; fuzzy partitioning; microarray gene expression data; molecular characterization; overlapping subsets; pattern recognition method; phenotype classification; supervised analysis tasks; tissue samples; Cancer; Data analysis; Diseases; Gene expression; Machine learning; Performance analysis; Space technology; Support vector machine classification; Support vector machines; Training data;
Conference_Titel :
Engineering in Medicine and Biology Society, 2006. EMBS '06. 28th Annual International Conference of the IEEE
Conference_Location :
New York, NY
Print_ISBN :
1-4244-0032-5
Electronic_ISBN :
1557-170X
DOI :
10.1109/IEMBS.2006.259348