DocumentCode
477993
Title
A Parallel Biclustering Algorithm for Gene Expressing Data
Author
Wei Liu ; Ling Chen ; Hongyu Qu ; Ling Qin
Author_Institution
Inst. of Inf. Sci. & Technol., Nanjing Univ. of Aeronaut. & Astronaut., Nanjing
Volume
1
fYear
2008
fDate
18-20 Oct. 2008
Firstpage
25
Lastpage
29
Abstract
Biclustering the gene expressing data is an important task in bioinformatics. A parallel biclustering algorithm for gene expressing data is presented. The algorithm starts from the data sets containing pair of rows and columns of the data matrix, and gets the biclusters by gradually adding columns and rows on the data sets. A pruning technique is also proposed to reduce computing time. Experimental results show that our algorithm has superiority to other similar algorithms in terms of processing speed and quality of clustering.
Keywords
bioinformatics; parallel algorithms; pattern clustering; bioinformatics; gene expressing data; parallel biclustering algorithm; pruning technique; Bioinformatics; Clustering algorithms; Computer science; Concurrent computing; Gene expression; Information science; Iterative methods; Laboratories; Software algorithms; Space technology; anti-monotone; biclustering; gene expression data;
fLanguage
English
Publisher
ieee
Conference_Titel
Natural Computation, 2008. ICNC '08. Fourth International Conference on
Conference_Location
Jinan
Print_ISBN
978-0-7695-3304-9
Type
conf
DOI
10.1109/ICNC.2008.818
Filename
4666804
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