• DocumentCode
    49175
  • Title

    An Enhanced Cluster-based Network Model for Calcium Signaling

  • Author

    Yiqun Yang ; Chai Kiat Yeo

  • Author_Institution
    Sch. of Comput. Eng., Nanyang Technol. Univ., Singapore, Singapore
  • Volume
    12
  • Issue
    5
  • fYear
    2013
  • fDate
    Sept. 2013
  • Firstpage
    788
  • Lastpage
    795
  • Abstract
    Nanonetwork is involved with a set of nanoscale components and their cooperative communication. Integrated with the biological units, molecular communication contributes to areas such as therapeutics, environment, food safety, and agriculture. In contrast to the Brownian motion of massive molecules and the DNA sequence transportation carried by flagellated bacterium, calcium signaling has a multinode structure and requires relatively uncomplicated implementation methods. The amplitude and frequency of the calcium waves vary due to different stimulations. The waves traverse the cellular network, while this process relies on the condition of gap junctional channel (GJC) and the extracellular circumstances. By controlling the permeability of the GJC and inhibiting the ATP receptors on the cell membrane, the calcium wave could be directed. In this paper, we propose a cluster-based network model which is composed of cells and nanosensors utilizing the properties of calcium signaling. The characterizations and advantages of the network model are presented along with the comparison against the biological experiment results. The comparison indicates that our proposed network model not only correctly simulates the biological behavior but also shows how the biological communication can be enhanced via external intervention.
  • Keywords
    Brownian motion; DNA; calcium; cellular biophysics; membranes; microorganisms; nanosensors; ATP receptors; Brownian motion; Ca; DNA sequence transportation; GJC; agriculture; biological communication; biological units; calcium signaling; calcium waves; cell membrane; cellular network; cluster-based network; cooperative communication; environment; extracellular circumstances; flagellated bacterium; food safety; gap junctional channel; massive molecules; molecular communication; multinode structure; nanonetwork; nanoscale components; nanosensors; therapeutics; Biological system modeling; Calcium; Computer architecture; Logic gates; Microprocessors; Permeability; Calcium signaling; cluster; gateway; nanonetwork;
  • fLanguage
    English
  • Journal_Title
    Nanotechnology, IEEE Transactions on
  • Publisher
    ieee
  • ISSN
    1536-125X
  • Type

    jour

  • DOI
    10.1109/TNANO.2013.2274045
  • Filename
    6563160