Title :
Validation of a model of regulation in the tryptophan operon against multiple experiment data using global optimisation
Author :
Kim, Jongrae ; Kim, Jung-Su ; Postlethwaite, Ian ; Heslop-Harrison, Pat ; Bates, Declan G.
Author_Institution :
Dept. of Aerosp. Eng., Univ. of Glasgow, Glasgow, UK
Abstract :
This paper is concerned with validating a mathematical model of regulation in the tryptophan operon using global optimization. Although a number of models for this biochemical network are proposed, in many cases only qualitative agreement between the model output and experimental data was demonstrated, since very little information is currently available to guide the selection of parameter values for the models. This paper presents a model validating method using both multiple experimental data and global optimization.
Keywords :
biochemistry; genetics; optimisation; proteins; biochemical network; global optimisation; mathematical model; tryptophan operon; Amino acids; Attenuation; Biochemistry; Biological system modeling; Control system synthesis; Equations; Feedback loop; Mathematical model; Optimization methods; Systems biology; Model validation; global optimization; parameter identification; tryptophan regulation;
Conference_Titel :
ICCAS-SICE, 2009
Conference_Location :
Fukuoka
Print_ISBN :
978-4-907764-34-0
Electronic_ISBN :
978-4-907764-33-3