DocumentCode :
509167
Title :
Completed L-measure and Hurst Exponent Based Choquet Integral Predicting Algorithm for Thermostable Proteins
Author :
Liu, Hsiang-chuan ; Chang, Horng-Jinh ; Liu, Yu-Lung ; Jheng, Yu-Du
Author_Institution :
Dept. of Bioinf., Asia Univ., Taichung, Taiwan
Volume :
2
fYear :
2009
fDate :
21-22 Nov. 2009
Firstpage :
522
Lastpage :
525
Abstract :
Establishing a good algorithm for predicting temperature of thermostable proteins is an important issue. In this study, an improved thermostable proteins prediction method using Hurst exponent and Choquet integral regression model based on completed L-measure is proposed. The main idea of this method is to integrate the physicochemical properties, fractal property and Choquet integral regression model for amino symbolic sequences with different lengths. For evaluating the performance of this new algorithm, a 5-fold Cross-Validation MSE is performed. Experimental result shows that this new prediction scheme is better than the Choquet integral regression model based on ¿-measure, P-measure and L-measure, respectively and two methods based on Hurst exponent and the traditional prediction models, ridge regression and multiple regression models, respectively.
Keywords :
proteins; regression analysis; Choquet integral predicting algorithm; Choquet integral regression model; Hurst exponent; L-measure; amino symbolic sequences; fractal property; physicochemical properties; thermostable proteins; Amino acids; Asia; Chemical industry; Electrostatics; Food industry; Prediction algorithms; Predictive models; Proteins; Solvents; Temperature;
fLanguage :
English
Publisher :
ieee
Conference_Titel :
Intelligent Information Technology Application, 2009. IITA 2009. Third International Symposium on
Conference_Location :
Nanchang
Print_ISBN :
978-0-7695-3859-4
Type :
conf
DOI :
10.1109/IITA.2009.362
Filename :
5369585
Link To Document :
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