• DocumentCode
    509167
  • Title

    Completed L-measure and Hurst Exponent Based Choquet Integral Predicting Algorithm for Thermostable Proteins

  • Author

    Liu, Hsiang-chuan ; Chang, Horng-Jinh ; Liu, Yu-Lung ; Jheng, Yu-Du

  • Author_Institution
    Dept. of Bioinf., Asia Univ., Taichung, Taiwan
  • Volume
    2
  • fYear
    2009
  • fDate
    21-22 Nov. 2009
  • Firstpage
    522
  • Lastpage
    525
  • Abstract
    Establishing a good algorithm for predicting temperature of thermostable proteins is an important issue. In this study, an improved thermostable proteins prediction method using Hurst exponent and Choquet integral regression model based on completed L-measure is proposed. The main idea of this method is to integrate the physicochemical properties, fractal property and Choquet integral regression model for amino symbolic sequences with different lengths. For evaluating the performance of this new algorithm, a 5-fold Cross-Validation MSE is performed. Experimental result shows that this new prediction scheme is better than the Choquet integral regression model based on ¿-measure, P-measure and L-measure, respectively and two methods based on Hurst exponent and the traditional prediction models, ridge regression and multiple regression models, respectively.
  • Keywords
    proteins; regression analysis; Choquet integral predicting algorithm; Choquet integral regression model; Hurst exponent; L-measure; amino symbolic sequences; fractal property; physicochemical properties; thermostable proteins; Amino acids; Asia; Chemical industry; Electrostatics; Food industry; Prediction algorithms; Predictive models; Proteins; Solvents; Temperature;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Intelligent Information Technology Application, 2009. IITA 2009. Third International Symposium on
  • Conference_Location
    Nanchang
  • Print_ISBN
    978-0-7695-3859-4
  • Type

    conf

  • DOI
    10.1109/IITA.2009.362
  • Filename
    5369585