Title :
Hybrid feature selection method for gene expression analysis
Author :
Liping Wang ; Han, B.L.
Author_Institution :
Dept. of Math., Nanjing Univ. of Aeronaut. & Astronaut., Nanjing, China
Abstract :
Feature selection is important and necessary for disease classification and prediction using high-dimensional gene expression data. A hybrid method integrating sparse representation with a two-sample statistical t-test to construct features from high-throughput microarray data is presented. The approach takes account of gene interaction and reduces the variable dimension by sparse linear combination, as well as considers the discriminative power of genes using component regression. Under the recurrent independence rule for classification, the experiment results on real data demonstrate the improvements of this hybrid technique over conventional methods.
Keywords :
diseases; feature selection; genetics; lab-on-a-chip; medical computing; patient diagnosis; -sample statistical t-test; component regression; discriminative power; disease classification; feature selection; gene expression analysis; gene interaction; high-dimensional gene expression data; high-throughput microarray data; hybrid feature selection method; hybrid technique; integrating sparse representation; recurrent independence rule; sparse linear combination;
Journal_Title :
Electronics Letters
DOI :
10.1049/el.2013.3296