• DocumentCode
    511075
  • Title

    A New Biclustering Method for Gene Expersion Data Based on Adaptive Multi Objective Particle Swarm Optimization

  • Author

    Lashkargir, Mohsen ; Monadjemi, S. Amirhassan ; Dastjerdi, Ahmad Baraani

  • Author_Institution
    Dept. of Comput. Eng., Islamic Azad Univ., Yazd, Iran
  • Volume
    1
  • fYear
    2009
  • fDate
    28-30 Dec. 2009
  • Firstpage
    559
  • Lastpage
    563
  • Abstract
    In recent years, with the development of microarray technique, discovery of useful knowledge from microarray data has become very important. Biclustering is a very useful data mining technique for discovering genes which have similar behavior. In microarray data, several objectives have to be optimized simultaneously and often these objectives are in conflict with each other. A multi objective model is very suitable for solving this problem. Our method proposes a Hybrid algorithm which is based on adaptive multi objective particle swarm optimization for discovering biclusters in gene expression data. In our method, we will consider a low level of overlapping among biclusters and as possible, will cover all elements of gene expression matrix. Experimental result in bench mark data base present a significant improvement in overlap among biclusters and coverage of elements in gene expression and quality of biclusters.
  • Keywords
    biology computing; data mining; genetics; particle swarm optimisation; adaptive multi objective particle swarm optimization; biclustering method; data mining technique; gene expression data; gene expression matrix; microarray technique; Clustering algorithms; Data engineering; Data mining; Evolutionary computation; Gene expression; Knowledge engineering; Particle swarm optimization; Patient monitoring; Robustness; Stochastic processes; biclustering; gene expersion data; multiobjective particle swarm;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Computer and Electrical Engineering, 2009. ICCEE '09. Second International Conference on
  • Conference_Location
    Dubai
  • Print_ISBN
    978-1-4244-5365-8
  • Electronic_ISBN
    978-0-7695-3925-6
  • Type

    conf

  • DOI
    10.1109/ICCEE.2009.245
  • Filename
    5380183