DocumentCode :
54721
Title :
Functional Impact of Autophagy-Related Genes on the Homeostasis and Dynamics of Pancreatic Cancer Cell Lines
Author :
Mazza, Tommaso ; Fusilli, Caterina ; Saracino, Chiara ; Mazzoccoli, Gianluigi ; Tavano, Francesca ; Vinciguerra, Manlio ; Pazienza, Valerio
Author_Institution :
Bioinf. Unit, IRCCS Casa Sollievo della Sofferenza-Mendel, Rome, Italy
Volume :
12
Issue :
3
fYear :
2015
fDate :
May-June 1 2015
Firstpage :
667
Lastpage :
678
Abstract :
Pancreatic cancer is a highly aggressive and chemotherapy-resistant malignant neoplasm. In basal condition, it is characterized by elevated autophagy activity, which is required for tumor growth and that correlates with treatment failure. We analyzed the expression of autophagy related genes in different pancreatic cancer cell lines. A correlation-based network analysis evidenced the sociality and topological roles of the autophagy-related genes after serum starvation. Structural and functional tests identified a core set of autophagy related genes, suggesting different scenarios of autophagic responses to starvation, which may be responsible for the clinical variations associated with pancreatic cancer pathogenesis.
Keywords :
cancer; cellular biophysics; genetics; tumours; autophagic responses; autophagy-related genes; chemotherapy-resistant malignant neoplasm; correlation-based network analysis; elevated autophagy activity; functional tests; homeostasis; pancreatic cancer cell lines; pancreatic cancer pathogenesis; serum starvation; structural tests; tumor growth; Bioinformatics; Cancer; Computational biology; Correlation; IEEE transactions; Modulation; Tumors; Autophagy; Network topology; Pancreatic cancer; Starvation; network topology; pancreatic cancer; starvation;
fLanguage :
English
Journal_Title :
Computational Biology and Bioinformatics, IEEE/ACM Transactions on
Publisher :
ieee
ISSN :
1545-5963
Type :
jour
DOI :
10.1109/TCBB.2014.2371824
Filename :
6965612
Link To Document :
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