• DocumentCode
    547282
  • Title

    Efficient similarity search on massive gene data based on cloud computing

  • Author

    Wang, Zhiqiong ; Chen, Hao ; Huang, Yalu ; Xu, Yu ; Yang, Longwei ; Xiao, Jingjing

  • Author_Institution
    Sino-Dutch Biomed. & Inf. Eng. Sch., Northeastern Univ., Shenyang, China
  • Volume
    2
  • fYear
    2011
  • fDate
    10-12 June 2011
  • Firstpage
    702
  • Lastpage
    706
  • Abstract
    As biomedical data grows rapidly nowadays, we are going to study how to efficiently apply cloud computing into biomedical problem. In this paper, the process of solving biomedical problem based on cloud computing is presented. First, the biomedical issue would be focus on the gene match and generation of large amount of the emulated data from real data. Second, a mathematical model is proposed to describe the problem. Third, the mathematical model is implemented into our MapReduce model, which means simulating the biomedical application rested on cloud computing. Finally, some experiments are conducted to test the performance of cloud computing on this issue. Besides, at the end of the paper, some advices are given to doctors and biomedical scientists.
  • Keywords
    biology computing; cloud computing; mathematical analysis; MapReduce model; biomedical application; biomedical data; biomedical problem; biomedical scientists; cloud computing; doctors; emulated data; massive gene data; mathematical model; similarity search; Biological system modeling; Cloud computing; Computational modeling; Computers; Data models; Mathematical model; Medical services; Cloud computing; Gene; Massive data; Similarity;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Computer Science and Automation Engineering (CSAE), 2011 IEEE International Conference on
  • Conference_Location
    Shanghai
  • Print_ISBN
    978-1-4244-8727-1
  • Type

    conf

  • DOI
    10.1109/CSAE.2011.5952601
  • Filename
    5952601