Title :
GPU-based high performance wave propagation simulation of ischemia in anatomically detailed ventricle
Author :
Zhang, Lei ; Gai, Changqing ; Wang, Kuanquan ; Lu, Weigang ; Zuo, Wangmeng
Author_Institution :
Harbin Inst. of Technol., Harbin, China
Abstract :
In this study, we present a framework to simulate multi-scale wave propagation of ischemia which leverages the high-performance computing capacity of Graphic Processing Units (GPU). To cope with the no-flux boundary condition and address the branch deficiency, a phase-field method is employed. An on-the-fly visualization method of two dimensional simulation results is proposed. A fusion volume visualization method of both simulation result and anatomy structure data is provided to show ischemia with supporting spatial information in the heart. The experimental results show that the speedup of our GPU-based simulation method is about at least 20 times faster than that of conventional CPU-based simulation method.
Keywords :
blood vessels; cardiology; data visualisation; diseases; graphics processing units; medical computing; wave propagation; CPU-based simulation method; GPU-based high performance wave propagation simulation; GPU-based simulation method; anatomically detailed ventricle; anatomy structure data; branch deficiency; fusion volume visualization method; graphic processing units; high-performance computing capacity; ischemia; multiscale wave propagation; no-flux boundary condition; on-the-fly visualization method; phase-field method; spatial information; two dimensional simulation; Computational modeling; Data visualization; Graphics processing unit; Heart; Humans; Propagation; Rendering (computer graphics);
Conference_Titel :
Computing in Cardiology, 2011
Conference_Location :
Hangzhou
Print_ISBN :
978-1-4577-0612-7