• DocumentCode
    561884
  • Title

    Computer vision for human stem cell derived cardiomyocyte classification: The induced pluripotent vs embryonic stem cell case study

  • Author

    Paci, Michelangelo ; Nanni, L. ; Lahti, A. ; Severi, S. ; Aalto-Setälä, K. ; Hyttinen, J.

  • Author_Institution
    DEIS, Univ. of Bologna, Cesena, Italy
  • fYear
    2011
  • fDate
    18-21 Sept. 2011
  • Firstpage
    569
  • Lastpage
    572
  • Abstract
    Human induced pluripotent stem cell-derived cardiomyocytes (hiPSC-CMs) represent a potential valuable alternative to human embryonic stem cell-derived cardiomyocytes (hESC-CMs) for the lack of ethical issues and their patient-specificity. Recent studies showed hiPSC-CMs behave like hESC-CMs in terms of membrane currents, contractility and frequency of spontaneous pacing but their similarities need to be studied more. In this work we applied a well tested image processing approach based on texture feature extraction (local binary patterns, Haralick features and threshold adjacency statistics) and classification by support vector machines to hiPSC-CMs and hESC-CMs images from contrast phase microscopy. Our results suggested a good discrimination power of the chosen feature set meaning that some structural differences may still remain between the two cell classes.
  • Keywords
    biomembranes; computer vision; ethical aspects; feature extraction; image classification; image texture; medical image processing; microscopy; support vector machines; Haralick features; cardiomyocyte classification; computer vision; contractility; contrast phase microscopy; ethical issues; human embryonic stem cell-derived cardiomyocytes; human induced pluripotent stem cell-derived cardiomyocytes; human stem cell; image processing approach; local binary patterns; membrane currents; patient-specificity; spontaneous pacing; structural difference; support vector machines; texture feature extraction; threshold adjacency statistics; Drugs; Feature extraction; Humans; Motion pictures; Protocols; Stem cells; Support vector machines;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Computing in Cardiology, 2011
  • Conference_Location
    Hangzhou
  • ISSN
    0276-6547
  • Print_ISBN
    978-1-4577-0612-7
  • Type

    conf

  • Filename
    6164629