Multi-database retrieval technology on CPSE-Bio

Author

Xie, Jiang ; Yi, Ronggui ; Tan, Jun ; Cheng, Xiao ; Dai, Dongbo ; Zhang, Wu

Author_Institution

Sch. of Comput. Eng. & Sci., Shanghai Univ., Shanghai, China

fYear

2011

fDate

Nov. 29 2011-Dec. 1 2011

Firstpage

380

Lastpage

384

Abstract

A vast number of Protein-Protein Interactions (PPIs) databases and different data formats among them make it difficult for researchers to research PPIs efficiently. We propose the Integrated Query Database (IQD) and Hot-Spot Database (HSD) on CPSE-Bio (PSE-Bio based on Cloud computing) to solve this problem in this paper. The IQD integrates several PPIs databases and researchers can retrieve PPIs in IQD one time rather than in other databases repeatedly. The HSD are also established in order to improve the efficiency of PPIs retrieval. Experimental results show that the IQD and HSD technologies enhance the PPIs retrieval efficiency remarkable.

Keywords

bioinformatics; cloud computing; proteins; query processing; CPSE-Bio; HSD technology; IQD technology; PPI retrieval; cloud computing; hot-spot database; integrated query database; multidatabase retrieval technology; protein-protein interaction; Bioinformatics; Computational modeling; Computers; Databases; Educational institutions; Proteins; Roads;

fLanguage

English

Publisher

ieee

Conference_Titel

Computer Sciences and Convergence Information Technology (ICCIT), 2011 6th International Conference on

Conference_Location

Seogwipo

Print_ISBN

978-1-4577-0472-7

Type

conf

Filename

6316642