Title :
Complex indicator sequence for coding region prediction
Author :
Jleed, H. ; Ferh, A.
Author_Institution :
Dept. of Electr. & Comput. Eng., Almergheb Univ., Alkhoms, Libya
Abstract :
This paper discusses a new method that predicts coding regions in the DNA sequences. By using complex mapping of nucleotide sequence and Fourier spectral characteristics, the method employs a model of the period-3 periodicity of exons. This technique improves the coding prediction accuracy that distinguishes between coding and non-coding regions by boosting the protein coding region and suppressing the non-coding region within the DNA sequences.
Keywords :
DNA; Fourier transforms; biology computing; proteins; DNA sequences; Fourier spectral characteristic; coding region prediction; complex indicator sequence; complex mapping; exons; nucleotide sequence; period-3 periodicity; protein coding; Bioinformatics; DNA; Digital filters; Discrete Fourier transforms; Encoding; Genomics; Proteins; DNA; Discrete Fourier transforms; complex Indicator; indicator sequence;
Conference_Titel :
Computer Applications Technology (ICCAT), 2013 International Conference on
Conference_Location :
Sousse
Print_ISBN :
978-1-4673-5284-0
DOI :
10.1109/ICCAT.2013.6521978
