Title :
Fiber orientation distribution from non-negative sparse recovery
Author :
Ghosh, A. ; Megherbi, Thinhinane ; Boumghar, Fatima Oulebsir ; Deriche, Rachid
Author_Institution :
Project Team Athena, INRIA, Sophia Antipolis, France
Abstract :
We revisit the theory of spherical deconvolution and propose a new fiber orientation distribution (FOD) model that can efficiently reconstruct extremely narrow fiber-crossings from limited number of acquisitions. First, we show how to physically model fiber-orientations as rank-1 tensors. Then, we parameterize the FODs with tensors that are decomposable into non-negative sums of rank-1 tensors and finally, we propose a non-negative sparse recovery scheme to estimate FODs of any tensor order from limited acquisitions. Our method features three important advantages: (1) it estimates non-negative FODs, (2) it estimates the number of fiber-compartments, which need not be predefined and (3) it computes the fiber-directions directly, rendering maxima detection superfluous. We test for various SNRs on synthetic, phantom and real data and find our method accurate and robust to signal-noise: fibers crossing up to 23° are recovered from just 21 acquisitions. This opens new and exciting perspectives in diffusion MRI (dMRI), where our improved characterization of the FOD can be of great help for applications such as tractography.
Keywords :
biodiffusion; biomedical MRI; deconvolution; image reconstruction; medical image processing; parameter estimation; phantoms; physiological models; FOD characterization; FOD parameterization; SNR; diffusion MRI; fiber orientation distribution model; fiber-compartment number estimation; fiber-direction; fiber-orientation physical model; limited acquisition; maxima detection superfluous rendering; narrow fiber-crossing reconstruction; nonnegative FOD estimation; nonnegative sparse recovery scheme; phantom; rank-1 tensors; signal-noise; spherical deconvolution theory; tractography; Deconvolution; Diffusion tensor imaging; Noise; Optical fiber theory; Phantoms; Signal resolution; Tensile stress; FOD; dMRI; non-negative least square; sparsity; spherical harmonics; tensor decomposition; tensors;
Conference_Titel :
Biomedical Imaging (ISBI), 2013 IEEE 10th International Symposium on
Conference_Location :
San Francisco, CA
Print_ISBN :
978-1-4673-6456-0
DOI :
10.1109/ISBI.2013.6556460