Title :
Biomolecular resource utilization in elementary cell-free gene circuits
Author :
Siegal-Gaskins, Dan ; Noireaux, Vincent ; Murray, Richard M.
Author_Institution :
Dept. of Bioeng., California Inst. of Technol., Pasadena, CA, USA
Abstract :
We present a detailed dynamical model of the behavior of transcription-translation circuits in vitro that makes explicit the roles played by essential molecular resources. A set of simple two-gene test circuits operating in a cell-free biochemical `breadboard´ validate this model and highlight the consequences of limited resource availability. In particular, we are able to confirm the existence of biomolecular `crosstalk´ and isolate its individual sources. The implications of crosstalk for biomolecular circuit design and function are discussed.
Keywords :
biochemistry; biomolecular electronics; cellular biophysics; genetics; molecular biophysics; network synthesis; biomolecular circuit design; biomolecular circuit function; biomolecular crosstalk; biomolecular resource utilization; cell-free biochemical breadboard; dynamical model; elementary cell-free gene circuits; limited resource availability; molecular resources; simple two-gene test circuits; transcription-translation circuits; Biological system modeling; Crosstalk; In vitro; Integrated circuit modeling; Mathematical model; Proteins; RNA;
Conference_Titel :
American Control Conference (ACC), 2013
Conference_Location :
Washington, DC
Print_ISBN :
978-1-4799-0177-7
DOI :
10.1109/ACC.2013.6580053