Title :
Tumor classification via a simultaneous structure sparse representation model
Author_Institution :
Dept. of Comput. Sci., Baoji Univ. of Arts & Sci., Baoji, China
Abstract :
Cancer diagnosis is an important clinical application of gene expression microarray technology. This paper proposes a new model for tumor classification. The key idea is to implement the similar joint decomposition approach in the context of sparse coding with subsequences of gene expression data (SGED). Based on this idea, we formulate a simultaneous structure sparse model for tumor classification. Finally, experimental results in five tumor gene expression datasets show that the proposed method outperforms sparse representation method.
Keywords :
cancer; genetics; medical diagnostic computing; patient diagnosis; pattern classification; tumours; cancer diagnosis; clinical application; gene expression data subsequences; gene expression microarray technology; similar joint decomposition approach; simultaneous structure sparse representation model; sparse coding; tumor classification; tumor gene expression datasets; Sparse representation; gene expression data; structure sparse; tumor classification;
Conference_Titel :
Biomedical Engineering and Informatics (BMEI), 2013 6th International Conference on
Conference_Location :
Hangzhou
Print_ISBN :
978-1-4799-2760-9
DOI :
10.1109/BMEI.2013.6747005