DocumentCode :
71471
Title :
Architecture-dependent robustness in a class of multiple positive feedback loops
Author :
Changhong Shi ; Han-Xiong Li ; Tianshou Zhou
Author_Institution :
Guangdong Province Key Lab. of Comput. Sci., Sun Yat-Sen Univ., Guangzhou, China
Volume :
7
Issue :
1
fYear :
2013
fDate :
Feb-13
Firstpage :
1
Lastpage :
10
Abstract :
Many types of multiple positive feedbacks with each having potentials to generate bistability exist extensively in natural, raising the question of why a particular architecture is present in a cell. In this study, the authors investigate multiple positive feedback loops across three classes: one-loop class, two-loop class and three-loop class, where each class is composed of double positive feedback loop (DPFL) or double negative feedback loop (DNFL) or both. Through large-scale sampling and robustness analysis, the authors find that for a given class, the homogeneous DPFL circuit (i.e. the coupled circuit that is composed of only DPFLs) is more robust than all the other circuits in generating bistable behaviour. In addition, stochastic simulation shows that the low stable state is more robust than the high stable state in homogeneous DPFL whereas the high-stable state is more robust than the low-stable state in homogeneous DNFL circuits. It was argued that this investigation provides insight into the relationship between robustness and network architecture.
Keywords :
feedback; stochastic processes; architecture-dependent robustness analysis; bistable behaviour; double negative feedback loop; double positive feedback loop; homogeneous DNFL circuits; homogeneous DPFL circuit; large-scale sampling; multiple positive feedback loops; network architecture; one-loop class; stochastic simulation; three-loop class; two-loop class;
fLanguage :
English
Journal_Title :
Systems Biology, IET
Publisher :
iet
ISSN :
1751-8849
Type :
jour
DOI :
10.1049/iet-syb.2011.0090
Filename :
6518035
Link To Document :
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