• DocumentCode
    724924
  • Title

    Detection and estimation of membrane diffusion during exocytosis in TIRFM image sequences

  • Author

    Basset, A. ; Bouthemy, P. ; Boulanger, J. ; Waharte, F. ; Kervrann, C. ; Salamero, J.

  • Author_Institution
    Centre Rennes - Bretagne Atlantique, Inria, Rennes, France
  • fYear
    2015
  • fDate
    16-19 April 2015
  • Firstpage
    695
  • Lastpage
    698
  • Abstract
    Assessing the dynamics of plasma membrane diffusion processes in live cell fluorescence microscopy is of paramount interest to understand cell mechanisms. We propose a new method to detect vesicle fusion events, and estimate the associated diffusion coefficients in image sequences of total internal reflection fluorescence microscopy (TIRFM). In contrast to usual approaches, a diffusion coefficient is locally estimated for each detected fusing vesicle. We first detect the membrane fusion events and then select the diffusion configurations among them with a correlation test. To estimate the diffusion coefficient, a geometric model is fitted to the detected spot directly in the 2D+t subvolume. Quantitative results demonstrate the accuracy of the proposed method.
  • Keywords
    biodiffusion; biological techniques; biology computing; biomembrane transport; fluorescence; image sequences; optical microscopy; 2D+t subvolume; TIRFM image sequences; cell mechanisms; correlation test; diffusion coefficients; diffusion configurations; exocytosis; geometric model; live cell fluorescence microscopy; membrane fusion events; plasma membrane diffusion processes; total internal reflection fluorescence microscopy; vesicle fusion event detection; Biomembranes; Correlation; Estimation; Image sequences; Microscopy; Plasmas; Proteins; Event detection; TIRFM; diffusion estimation; ex-ocytosis dynamics; lateral diffusion in membrane;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Biomedical Imaging (ISBI), 2015 IEEE 12th International Symposium on
  • Conference_Location
    New York, NY
  • Type

    conf

  • DOI
    10.1109/ISBI.2015.7163968
  • Filename
    7163968