Title :
Data-Driven Rule Mining and Representation of Temporal Patterns in Physiological Sensor Data
Author :
Banaee, Hadi ; Loutfi, Amy
Author_Institution :
Dept. of Sci. & Technol., Orebro Univ., Orebro, Sweden
Abstract :
Mining and representation of qualitative patterns is a growing field in sensor data analytics. This paper leverages from rule mining techniques to extract and represent temporal relation of prototypical patterns in clinical data streams. The approach is fully data-driven, where the temporal rules are mined from physiological time series such as heart rate, respiration rate, and blood pressure. To validate the rules, a novel similarity method is introduced, that compares the similarity between rule sets. An additional aspect of the proposed approach has been to utilize natural language generation techniques to represent the temporal relations between patterns. In this study, the sensor data in the MIMIC online database was used for evaluation, in which the mined temporal rules as they relate to various clinical conditions (respiratory failure, angina, sepsis, ...) were made explicit as a textual representation. Furthermore, it was shown that the extracted rule set for any particular clinical condition was distinct from other clinical conditions.
Keywords :
cardiology; data mining; medical computing; pneumodynamics; blood pressure; clinical data streams; data-driven rule mining; heart rate; natural language generation techniques; on-line database; physiological sensor data; physiological time series; prototypical patterns; qualitative patterns; respiration rate; sensor data analytics; temporal pattern representation; temporal relations; textual representation; Association rules; Biomedical monitoring; Heart rate; Itemsets; Physiology; Time series analysis; Data-driven modeling; data-driven modelling; health informatics; linguistic representation; pattern abstraction; physiological sensor data; sensor data analysis; temporal rule mining;
Journal_Title :
Biomedical and Health Informatics, IEEE Journal of
DOI :
10.1109/JBHI.2015.2438645