• DocumentCode
    78666
  • Title

    A Statistical Modeling Approach for Tumor-Type Identification in Surgical Neuropathology Using Tissue Mass Spectrometry Imaging

  • Author

    Gholami, B. ; Norton, I. ; Eberlin, L.S. ; Agar, N.Y.R.

  • Author_Institution
    Dept. of Neurosurg., Harvard Med. Sch., Boston, MA, USA
  • Volume
    17
  • Issue
    3
  • fYear
    2013
  • fDate
    May-13
  • Firstpage
    734
  • Lastpage
    744
  • Abstract
    Current clinical practice involves classification of biopsied or resected tumor tissue based on a histopathological evaluation by a neuropathologist. In this paper, we propose a method for computer-aided histopathological evaluation using mass spectrometry imaging. Specifically, mass spectrometry imaging can be used to acquire the chemical composition of a tissue section and, hence, provides a framework to study the molecular composition of the sample while preserving the morphological features in the tissue. The proposed classification framework uses statistical modeling to identify the tumor type associated with a given sample. In addition, if the tumor type for a given tissue sample is unknown or there is a great degree of uncertainty associated with assigning the tumor type to one of the known tumor models, then the algorithm rejects the given sample without classification. Due to the modular nature of the proposed framework, new tumor models can be added without the need to retrain the algorithm on all existing tumor models.
  • Keywords
    biochemistry; diseases; feature extraction; mass spectroscopic chemical analysis; medical signal processing; neurophysiology; signal classification; statistical analysis; tumours; algorithm training; biopsied tumor tissue classification; classification framework; computer-aided histopathological evaluation; known tumor model; modular nature; neuropathologist; resected tumor tissue classification; sample molecular composition; sample rejection; statistical modeling approach; surgical neuropathology; tissue mass spectrometry imaging; tissue morphological feature; tissue section chemical composition; tumor type assignment uncertainty; tumor type identification; tumor-type identification; Brain models; Data models; Imaging; Ionization; Mass spectroscopy; Tumors; Classification; mass spectrometry (MS); neuropathology; statistical model;
  • fLanguage
    English
  • Journal_Title
    Biomedical and Health Informatics, IEEE Journal of
  • Publisher
    ieee
  • ISSN
    2168-2194
  • Type

    jour

  • DOI
    10.1109/JBHI.2013.2250983
  • Filename
    6473811