• DocumentCode
    78800
  • Title

    An Optimization-Based Design Framework for Steering Steady States and Improving Robustness of Glycolysis–Glycogenolysis Pathway

  • Author

    Panja, Surajit ; Patra, S. ; Mukherjee, Arjun ; Basu, Mainak ; Sengupta, Sabyasachi ; Dutta, Pranab K.

  • Author_Institution
    Dept. of Electr. Eng., Indian Inst. of Technol., Kharagpur, Kharagpur, India
  • Volume
    60
  • Issue
    2
  • fYear
    2013
  • fDate
    Feb. 2013
  • Firstpage
    554
  • Lastpage
    561
  • Abstract
    A robust synthesis technique is devised for synergism and saturation systems, commonly known as S-systems, for controlling the steady states of the glycolysis-glycogenolysis pathway. The development of the robust biochemical network is essential owing to the fragile response to the perturbation of intrinsic and extrinsic parameters of the nominal S-system. The synthesis problem is formulated in a computationally attractive convex optimization framework. The linear matrix inequalities are framed to aim at the minimization of steady-state error, improvement of robustness, and utilization of minimum control input to the biochemical network.
  • Keywords
    biochemistry; linear matrix inequalities; minimisation; S-systems; computationally attractive convex optimization framework; glycolysis-glycogenolysis pathway; linear matrix inequalities; minimization; optimization-based design framework; perturbation; robust biochemical network; robust synthesis technique; saturation systems; steady state steering; steady-state error; Artificial intelligence; Biochemistry; Biological system modeling; Mathematical model; Robustness; Steady-state; Vectors; Glycogenolysis; S-system; glycolysis; linear matrix inequality (LMI); robustness; Computer Simulation; Glycogenolysis; Glycolysis; Kinetics; Models, Biological; Software; Systems Biology;
  • fLanguage
    English
  • Journal_Title
    Biomedical Engineering, IEEE Transactions on
  • Publisher
    ieee
  • ISSN
    0018-9294
  • Type

    jour

  • DOI
    10.1109/TBME.2012.2230259
  • Filename
    6363577