Title :
An Optimization-Based Design Framework for Steering Steady States and Improving Robustness of Glycolysis–Glycogenolysis Pathway
Author :
Panja, Surajit ; Patra, S. ; Mukherjee, Arjun ; Basu, Mainak ; Sengupta, Sabyasachi ; Dutta, Pranab K.
Author_Institution :
Dept. of Electr. Eng., Indian Inst. of Technol., Kharagpur, Kharagpur, India
Abstract :
A robust synthesis technique is devised for synergism and saturation systems, commonly known as S-systems, for controlling the steady states of the glycolysis-glycogenolysis pathway. The development of the robust biochemical network is essential owing to the fragile response to the perturbation of intrinsic and extrinsic parameters of the nominal S-system. The synthesis problem is formulated in a computationally attractive convex optimization framework. The linear matrix inequalities are framed to aim at the minimization of steady-state error, improvement of robustness, and utilization of minimum control input to the biochemical network.
Keywords :
biochemistry; linear matrix inequalities; minimisation; S-systems; computationally attractive convex optimization framework; glycolysis-glycogenolysis pathway; linear matrix inequalities; minimization; optimization-based design framework; perturbation; robust biochemical network; robust synthesis technique; saturation systems; steady state steering; steady-state error; Artificial intelligence; Biochemistry; Biological system modeling; Mathematical model; Robustness; Steady-state; Vectors; Glycogenolysis; S-system; glycolysis; linear matrix inequality (LMI); robustness; Computer Simulation; Glycogenolysis; Glycolysis; Kinetics; Models, Biological; Software; Systems Biology;
Journal_Title :
Biomedical Engineering, IEEE Transactions on
DOI :
10.1109/TBME.2012.2230259