DocumentCode :
844591
Title :
An Adaptive Multimeme Algorithm for Designing HIV Multidrug Therapies
Author :
Neri, Ferrante ; Toivanen, Jari ; Cascella, Giuseppe Leonardo ; Ong, Yew-Soon
Author_Institution :
Dept. of Math. Inf. Tech., Agora Univ. of Jyvaskyla
Volume :
4
Issue :
2
fYear :
2007
Firstpage :
264
Lastpage :
278
Abstract :
This paper proposes a period representation for modeling the multidrug HIV therapies and an adaptive multimeme algorithm (AMmA) for designing the optimal therapy. The period representation offers benefits in terms of flexibility and reduction in dimensionality compared to the binary representation. The AMmA is a memetic algorithm which employs a list of three local searchers adaptively activated by an evolutionary framework. These local searchers, having different features according to the exploration logic and the pivot rule, have the role of exploring the decision space from different and complementary perspectives and, thus, assisting the standard evolutionary operators in the optimization process. Furthermore, the AMmA makes use of an adaptation which dynamically sets the algorithmic parameters in order to prevent stagnation and premature convergence. The numerical results demonstrate that the application of the proposed algorithm leads to very efficient medication schedules which quickly stimulate a strong immune response to HIV. The earlier termination of the medication schedule leads to lesser unpleasant side effects for the patient due to strong antiretroviral therapy. A numerical comparison shows that the AMmA is more efficient than three popular metaheuristics. Finally, a statistical test based on the calculation of the tolerance interval confirms the superiority of the AMmA compared to the other methods for the problem under study
Keywords :
diseases; drugs; medical computing; optimisation; statistical analysis; HIV multildrug therapies; adaptive multimeme algorithm; antiretroviral therapy; local searchers; memetic algorithm; optimization; standard evolutionary operators; statistical test; Algorithm design and analysis; Convergence; Heuristic algorithms; Human immunodeficiency virus; Immune system; Logic; Medical treatment; Scheduling algorithm; Space exploration; Testing; HIV therapy design; adaptive algorithms; memetic algorithms; nonlinear integer programming.; Algorithms; Anti-HIV Agents; Biomimetics; Computer Simulation; Drug Combinations; Drug Design; Drug Therapy, Computer-Assisted; HIV Infections; Humans; Immunity, Natural; Models, Immunological;
fLanguage :
English
Journal_Title :
Computational Biology and Bioinformatics, IEEE/ACM Transactions on
Publisher :
ieee
ISSN :
1545-5963
Type :
jour
DOI :
10.1109/TCBB.2007.070202
Filename :
4196537
Link To Document :
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