Title of article :
lncRNA VLDLR-AS1 Gene Expression in Colorectal Cancer in Patients from East Azerbaijan Province, Iran
Author/Authors :
Moqadami ، Amin Department of Animal Biology - Faculty of Natural Sciences - University of Tabriz , Ahmadi ، Alireza Department of Animal Biology - Faculty of Natural Sciences - University of Tabriz , Khalaj-Kondori ، Mohammad Department of Animal Biology - Faculty of Natural Sciences - University of Tabriz
Abstract :
Background: Colorectal cancer (CRC) is the third most common cancer that frequently spreads to other parts of the body, with a low chance of recovery and a high mortality rate. Long non-coding RNAs are considered significant prognostic and diagnostic indicators because they are dysregulated in various cancers and have distinctive expression patterns and high tissue- and cell-specificity. VLDLR-AS1lncRNA deregulation has been associated with several malignancies. Objectives: This study aimed to evaluate the expression levels of VLDLR-AS1in CRC. It was the first time this assessment was conducted. Methods: We studied 188 samples, including 94 tumor samples and 94 paired adjacent non-tumor tissues. Total RNA was extracted, and its quantity and purity were assessed. TaKaRa PrimeScript 1st Strand cDNA Synthesis Kit (Kusatsu, Japan) was used for the reaction. The StepOnePlus Real-Time PCR System (Applied Biosystems) was set up to assess the relative expression of VLDLR-AS1. Results: According to the qRT-PCR data, the VLDLR-AS1expression levels in CRC tissues were significantly lower than in tumor margins (P 0.0001). In addition, receiver operating characteristic curve analysis demonstrated that VLDLR-AS1expression can discriminate between tumor and non-tumor samples with the sensitivity and specificity of 72.34% and 51.06%, respectively (P = 0.03, AUC = 0.6274). However, no significant association was found between the expression levels of VLDLR-AS1and clinicopathological features in CRC patients. Conclusions: The results of this study indicated that VLDLR-AS1lncRNA is significantly downregulated in the tumor tissues of CRC patients compared to healthy tumor margin tissues. This evidence shows the potential of this gene as a promising biomarker for the early detection of CRC development.
Keywords :
Colorectal Cancer , LncRNA , VLDLR , AS1 , Biomarker
Journal title :
Jentashapir Journal of Cellular and Molecular Biology
Journal title :
Jentashapir Journal of Cellular and Molecular Biology