DocumentCode
1506041
Title
On the Transient and Steady-State Estimates of Interval Genetic Regulatory Networks
Author
Li, Ping ; Lam, James ; Shu, Zhan
Author_Institution
Dept. of Mech. Eng., Univ. of Hong Kong, Hong Kong, China
Volume
40
Issue
2
fYear
2010
fDate
4/1/2010 12:00:00 AM
Firstpage
336
Lastpage
349
Abstract
This paper is concerned with the transient and steady-state estimates of a class of genetic regulatory networks (GRNs). Some sufficient conditions, which do not only present the transient estimate but also provide the estimates of decay rate and decay coefficient of the GRN with interval parameter uncertainties (interval GRN), are established by means of linear matrix inequality (LMI) and Lyapunov-Krasovskii functional. Moreover, the steady-state estimate of the proposed GRN model is also investigated. Furthermore, it is well known that gene regulation is an intrinsically noisy process due to intracellular and extracellular noise perturbations and environmental fluctuations. Then, by utilizing stochastic differential equation theory, the obtained results are extended to the case with noise perturbations due to natural random fluctuations. All the conditions are expressed within the framework of LMIs, which can easily be computed by using standard numerical software. A three-gene network is provided to illustrate the effectiveness of the theoretical results.
Keywords
Lyapunov methods; biology computing; differential equations; linear matrix inequalities; mathematics computing; stochastic processes; uncertain systems; LMI; Lyapunov-Krasovskii functional; decay rate estimate; environmental fluctuation; extracellular noise perturbation; gene regulation; interval GRN; interval genetic regulatory network; interval parameter uncertainty; intracellular noise perturbation; linear matrix inequality; natural random fluctuation; standard numerical software; steady state estimate; stochastic differential equation theory; three gene network; transient estimate; Exponential estimate; genetic regulatory network (GRN); interval system; steady-state estimate; stochastic perturbation; Algorithms; Computer Simulation; Gene Expression Regulation; Gene Regulatory Networks; Models, Genetic; Stochastic Processes; Systems Biology;
fLanguage
English
Journal_Title
Systems, Man, and Cybernetics, Part B: Cybernetics, IEEE Transactions on
Publisher
ieee
ISSN
1083-4419
Type
jour
DOI
10.1109/TSMCB.2009.2022402
Filename
5291780
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