Title :
HEp-2 Cells Classification Using Morphological Features and a Bundle of Local Gradient Descriptors
Author :
Theodorakopoulos, Ilias ; Kastaniotis, Dimitris ; Economou, George ; Fotopoulos, Spiros
Author_Institution :
Dept. of Phys., Univ. of Patras, Patras, Greece
Abstract :
A system for automatic classification of staining patterns in IIF imaging is presented. A full pipeline of pre-processing, feature extraction and classification stages is designed in order to overcome specific challenges posed by the nature of the data. In the preprocessing stage the images are subjected to normalization and de-noising using a sparse representation-based technique. A set morphological features, extracted using multi-level thresholding, is combined with a bundle of local gradient descriptors, selected so as to encode textural and structural information of the fluorescent patterns in multiple scales. The proposed method was evaluated using a dataset with over 10K images achieving over 90 percent of classification accuracy.
Keywords :
cellular biophysics; feature extraction; image classification; image coding; image denoising; image representation; image segmentation; image texture; medical image processing; HEp-2 cell classification; IIF imaging; automatic staining pattern classification; bundle-of-local gradient descriptors; feature extraction stage; fluorescent patterns; image classification stage; image denoising; image normalization; image preprocessing stage; morphological feature extraction; multilevel thresholding; sparse representation-based technique; structural information encoding; textural information encoding; Accuracy; Conferences; Feature extraction; Fluorescence; Histograms; Imaging; Pattern recognition; Denoising via Sparse Representation; HEp-2 cells classification; IIF imaging; LBPs; Morphological features; SIFT; Staining patterns classification; VLAD;
Conference_Titel :
Pattern Recognition Techniques for Indirect Immunofluorescence Images (I3A), 2014 1st Workshop on
Conference_Location :
Stockholm
DOI :
10.1109/I3A.2014.16