DocumentCode
1735120
Title
Protein Local Tertiary Structure Prediction Using the Adaptively-Branching FGK-DF Model
Author
Chen, Bing ; Hudson, Cody ; Crawford, Aaron ; MinWoo Kim
Author_Institution
Dept. of Comput. Sci., Univ. of Central Arkansas, Conway, AR, USA
Volume
1
fYear
2013
Firstpage
378
Lastpage
381
Abstract
For the past twenty years, protein tertiary structure research has been given much attention. Unfortunately, each approach has significant shortcomings, such as necessary time, capital, or restrictions imposed by the method, limiting the resolution or novelty of produced tertiary structures. This work proposes the Adaptively-Branching Fuzzy Greedy K-means-Decision Forest (FGK-DF) model, which utilizes conserved sequential and structural motifs that transcend protein family boundaries, to predict the local tertiary structure of proteins with unknown structures.
Keywords
biology computing; fuzzy set theory; greedy algorithms; molecular biophysics; proteins; adaptively-branching FGK-DF model; adaptively-branching fuzzy greedy k-means-decision forest model; conserved sequential motif; produced tertiary structures; protein family boundary; protein local tertiary structure prediction; protein tertiary structure research; structural motif; Adaptation models; Decision trees; Hidden Markov models; Predictive models; Proteins; Training; Vegetation; Adaptive Branch; Decision Forest; FGK Model;
fLanguage
English
Publisher
ieee
Conference_Titel
Machine Learning and Applications (ICMLA), 2013 12th International Conference on
Conference_Location
Miami, FL
Type
conf
DOI
10.1109/ICMLA.2013.77
Filename
6784647
Link To Document