DocumentCode :
1824733
Title :
Geometric alignment of 2D gel electrophoresis images using physics-based elastic registration
Author :
Wörz, Stefan ; Winz, Marie Luise ; Rohr, Karl
Author_Institution :
Dept. Bioinf. & Functional Genomics, Univ. of Heidelberg, Heidelberg
fYear :
2008
fDate :
14-17 May 2008
Firstpage :
1135
Lastpage :
1138
Abstract :
A key technique for protein analysis is the geometric alignment of 2D gel electrophoresis (2-DE) images. We introduce a new hybrid elastic registration approach for 2-DE images, which is based on an analytic solution of the Navier equation. With this approach cross-effects in elastic deformations can be handled, which is important for the registration of 2-DE images. We have successfully applied our approach to register 2-DE gel images of different levels of complexity and have performed a quantitative evaluation of the results. We have also carried out a comparison with a previous hybrid elastic registration scheme.
Keywords :
biochemistry; bioelectric phenomena; electrophoresis; gels; image registration; medical image processing; molecular biophysics; proteins; 2-DE gel images; 2D gel electrophoresis images; Navier equation; elastic deformation; geometric alignment; hybrid elastic registration; physics-based elastic registration; protein analysis; quantitative evaluation; Bioinformatics; Computer vision; Deformable models; Electrokinetics; Genomics; Image analysis; Image registration; Protein engineering; Shape; Spline; Cross-effects; Gaussian elastic body splines; Gel electrophoresis; Hybrid elastic registration;
fLanguage :
English
Publisher :
ieee
Conference_Titel :
Biomedical Imaging: From Nano to Macro, 2008. ISBI 2008. 5th IEEE International Symposium on
Conference_Location :
Paris
Print_ISBN :
978-1-4244-2002-5
Electronic_ISBN :
978-1-4244-2003-2
Type :
conf
DOI :
10.1109/ISBI.2008.4541201
Filename :
4541201
Link To Document :
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