Title :
Genomic Signal Analysis of HIV-1 Clade F Gene Variability
Author_Institution :
Biomed. Eng. Center, Univ. "Politehnica" of Bucharest
Abstract :
The paper presents results on the study of HIV-1, Clade F, variability using IT techniques for the quantitative analysis of nucleotide sequences. Specifically, phase analysis and RNA secondary structure for the protease and reverse transcriptase genomic signals have been used to characterize the variability of HIV strains isolated in Romania. Variability signals with respect to average, median and maximum flat references, as well as digital derivative signals are used to describe HIV variability
Keywords :
diseases; genetics; medical signal processing; HIV gene variability signal; HIV strain; HIV-1 Clade F; RNA secondary structure; digital derivative signal; genomic signal analysis; human immunodeficiency virus; nucleotide sequence; pathogen variability; phase analysis; quantitative analysis; reverse transcriptase; ribonucleic acid; Acquired immune deficiency syndrome; Bioinformatics; Biological cells; Capacitive sensors; DNA; Genomics; Human immunodeficiency virus; RNA; Sequences; Signal analysis; Genomic signals; Pathogen variability; RNA secondary structure;
Conference_Titel :
Computer as a Tool, 2005. EUROCON 2005.The International Conference on
Conference_Location :
Belgrade
Print_ISBN :
1-4244-0049-X
DOI :
10.1109/EURCON.2005.1629844
