Title :
Spatiotemporal Analysis of an Agent-Based Model of a Colony of Keratinocytes: A First Approach for the Development of Validation Methods
Author :
Pichardo-Almarza, Cesar ; Smallwood, Rod ; Billings, S.A.
Author_Institution :
Sheffield Univ., Sheffield
Abstract :
Agent-based models are widely used for the simulation of systems from several domains (biology, economics, meteorology, etc). In biology agent-based models are very useful for predicting the social behaviour of systems; in particular they seem well adapted to model the behaviour of a cell population. In this paper an agent-based model, developed to study normal human keratinocytes (tissue cells), will be investigated. This kind of model exhibits probabilistic behaviour and the validation of simulation results is often done with a qualitative analysis by the experts (biologists). The main objective of this paper is to propose new variables and metrics that allow the comparison and a possible quantitative validation using numerical results from simulations.
Keywords :
biological tissues; biology computing; cellular biophysics; physiological models; spatiotemporal phenomena; agent-based model; keratinocytes; probabilistic behaviour; spatiotemporal analysis; tissue cells; Analytical models; Biological system modeling; Cells (biology); Computational biology; Economic forecasting; Humans; Meteorology; Predictive models; Spatiotemporal phenomena; Systems biology; Agent-based models; Spatiotemporal analysis; cell population; keratinocytes; validation;
Conference_Titel :
Bioinformatics and Bioengineering, 2007. BIBE 2007. Proceedings of the 7th IEEE International Conference on
Conference_Location :
Boston, MA
Print_ISBN :
978-1-4244-1509-0
DOI :
10.1109/BIBE.2007.4375710