DocumentCode :
2183435
Title :
Use of open linked data in bioinformatics space: A case study
Author :
Celebi, Remzi ; Gumus, Ozgur ; Aydin Son, Yesim
Author_Institution :
Dept. of Comput. Eng., Ege Univ., İzmir, Turkey
fYear :
2013
fDate :
25-27 Sept. 2013
Firstpage :
1
Lastpage :
5
Abstract :
In the life sciences, semantic web can support many aspects of bio- and health informatics, with exciting applications appearing in areas ranging from plant genetics to drug discovery. Using semantic technologies with open linked data, provides two kinds of advantages: ability to search multiple datasets through a single framework and ability to search relationships and paths of relationships that go across different datasets. The Bio2RDF project creates a network of coherently linked data across the biological databases. As part of the Bio2RDF project, an integrated bioinformatics warehouse on the semantic web is built. In this paper, a use case with a query for multiple distant data sources which are semantically available through Bio2RDF is defined. The validation of the results by traditional search techniques and discussion for future directions is presented.
Keywords :
bioinformatics; data warehouses; drugs; genetics; medical information systems; query processing; semantic Web; Bio2RDF project; bioinformatics space; biological databases; drug discovery; health informatics; integrated bioinformatics warehouse; life sciences; multiple datasets; multiple distant data sources; open linked data; plant genetics; query processing; search techniques; semantic Web; Bioinformatics; Decision support systems; Diseases; Indexes; Bio2RDF; Bioinformatics; Open Linked Data; SPARQL; Semantic Web;
fLanguage :
English
Publisher :
ieee
Conference_Titel :
Health Informatics and Bioinformatics (HIBIT), 2013 8th International Symposium on
Conference_Location :
Ankara
Print_ISBN :
978-1-4799-0700-7
Type :
conf
DOI :
10.1109/HIBIT.2013.6661679
Filename :
6661679
Link To Document :
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