• DocumentCode
    2422650
  • Title

    Optimization and Parallelization of DFT and TDDFT in GAMESS on DoD HPC Machines

  • Author

    Lasinski, Michael E. ; Romero, Nichols A. ; Yau, Anthony D. ; Kedziora, Gary ; Blaudeau, Jean-Philippe ; Brown, Shawn T.

  • Author_Institution
    High Performance Technol. Inc., Reston, VA
  • fYear
    2008
  • fDate
    14-17 July 2008
  • Firstpage
    437
  • Lastpage
    441
  • Abstract
    The quantum chemistry package General Atomic and Molecular Electronic Structure System (GAMESS) is employed in the first-principles modeling of complex molecular systems by using the density functional theory (DFT) as well as a number of other post-Hartree-Fock (HF) methods. Both DFT and time-dependent DFT (TDDFT) are of particular interest to the Department of Defense (DoD) Computational Biology, Chemistry, and Materials Science (CCM). Millions of CPU hours per year are expended by GAMESS calculations on DoD high performance computing (HPC) systems. Therefore, any reduction in wall-clock time for these calculations will represent a significant saving in CPU hours. As part of this work, three areas for improvement were identified: 1) replacement of the exchange-correlation (XC) integration grid, 2) TDDFT parallelization, and 3) profiling and optimization of the DFT and TDDFT. We summarize the work performed in these task areas and present the resulting speed-up. Our software enhancements are available to the general public in the 11APR2008R1 version of GAMESS.
  • Keywords
    HF calculations; defence industry; density functional theory; mainframes; optimisation; parallel machines; quantum chemistry; Department of Defense; DoD HPC machines; GAMESS; density functional theory; exchange-correlation integration grid; first-principles modeling; general atomic and molecular electronic structure system; high performance computing; optimization; parallelization; post-Hartree-Fock methods; quantum chemistry package; time-dependent DFT; Biological system modeling; Chemistry; Computational biology; Density functional theory; Electronics packaging; Game theory; Hafnium; Molecular electronics; Packaging machines; Quantum mechanics;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    DoD HPCMP Users Group Conference, 2008. DOD HPCMP UGC
  • Conference_Location
    Seattle, WA
  • Print_ISBN
    978-1-4244-3323-0
  • Type

    conf

  • DOI
    10.1109/DoD.HPCMP.UGC.2008.7
  • Filename
    4755906