DocumentCode
2422650
Title
Optimization and Parallelization of DFT and TDDFT in GAMESS on DoD HPC Machines
Author
Lasinski, Michael E. ; Romero, Nichols A. ; Yau, Anthony D. ; Kedziora, Gary ; Blaudeau, Jean-Philippe ; Brown, Shawn T.
Author_Institution
High Performance Technol. Inc., Reston, VA
fYear
2008
fDate
14-17 July 2008
Firstpage
437
Lastpage
441
Abstract
The quantum chemistry package General Atomic and Molecular Electronic Structure System (GAMESS) is employed in the first-principles modeling of complex molecular systems by using the density functional theory (DFT) as well as a number of other post-Hartree-Fock (HF) methods. Both DFT and time-dependent DFT (TDDFT) are of particular interest to the Department of Defense (DoD) Computational Biology, Chemistry, and Materials Science (CCM). Millions of CPU hours per year are expended by GAMESS calculations on DoD high performance computing (HPC) systems. Therefore, any reduction in wall-clock time for these calculations will represent a significant saving in CPU hours. As part of this work, three areas for improvement were identified: 1) replacement of the exchange-correlation (XC) integration grid, 2) TDDFT parallelization, and 3) profiling and optimization of the DFT and TDDFT. We summarize the work performed in these task areas and present the resulting speed-up. Our software enhancements are available to the general public in the 11APR2008R1 version of GAMESS.
Keywords
HF calculations; defence industry; density functional theory; mainframes; optimisation; parallel machines; quantum chemistry; Department of Defense; DoD HPC machines; GAMESS; density functional theory; exchange-correlation integration grid; first-principles modeling; general atomic and molecular electronic structure system; high performance computing; optimization; parallelization; post-Hartree-Fock methods; quantum chemistry package; time-dependent DFT; Biological system modeling; Chemistry; Computational biology; Density functional theory; Electronics packaging; Game theory; Hafnium; Molecular electronics; Packaging machines; Quantum mechanics;
fLanguage
English
Publisher
ieee
Conference_Titel
DoD HPCMP Users Group Conference, 2008. DOD HPCMP UGC
Conference_Location
Seattle, WA
Print_ISBN
978-1-4244-3323-0
Type
conf
DOI
10.1109/DoD.HPCMP.UGC.2008.7
Filename
4755906
Link To Document