DocumentCode
2475895
Title
Technologies of extraction and purification of microbial total DNA from a meadow soil
Author
Cao, Chengyou ; Yang, Min ; Xu, Xiaojiao ; Zhang, Ying
Author_Institution
Coll. of Sci., Northeastern Univ., Shenyang, China
fYear
2011
fDate
24-26 June 2011
Firstpage
7215
Lastpage
7218
Abstract
In order to select and establish an appropriate method for extracting and purifying the microbial total DNA from a meadow soil, seven extraction methods (five direct methods, one indirect method and one commercial kit method) and two purification methods were examined, with the quantity and quality of extracted and purified total DNA compared. The results showed that all the seven methods could extract the total DNA with a length of approximately 23 kb, among which, the SDS- high salt extraction method was the best. This method has a highest DNA yield, and the purity after purification of the DNA is close to that obtained by using kits, being available in 16S rDNA amplification. Between the two purification methods, the effect of agarose gel electrophoresis plus minicolumn was satisfactory and applicable for the purification of crude DNA from the meadow soil, with most of the purified total DNA being able to be PCR-amplified and meet the requirements of the purity of DNA in the follow-up molecular operations.
Keywords
DNA; biological techniques; electrophoresis; gels; microorganisms; molecular biophysics; purification; soil; DNA extraction; DNA purification; SDS high salt extraction method; agarose gel electrophoresis; commercial kit method; crude DNA; indirect method; meadow soil; microbial total DNA; minicolumn; rDNA amplification; Cloning; DNA; Microorganisms; Purification; Sediments; Soil; Meadow soil; PCR amplification; extraction; purification; total DNA;
fLanguage
English
Publisher
ieee
Conference_Titel
Remote Sensing, Environment and Transportation Engineering (RSETE), 2011 International Conference on
Conference_Location
Nanjing
Print_ISBN
978-1-4244-9172-8
Type
conf
DOI
10.1109/RSETE.2011.5966032
Filename
5966032
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