• DocumentCode
    2495698
  • Title

    On the effectiveness of discretization on gene selection of microarray data

  • Author

    Bolón-Canedo, V. ; Sánchez-Maroño, N. ; Alonso-Betanzos, A.

  • Author_Institution
    Dept. of Comput. Sci., Univ. of A Coruna, Coruna, Spain
  • fYear
    2010
  • fDate
    18-23 July 2010
  • Firstpage
    1
  • Lastpage
    8
  • Abstract
    DNA microarray data is a challenging issue for machine learning researchers due to the high number of gene expression contained and the small samples sizes. To deal with this problem, feature selection methods, such as filters and wrappers, are typically applied to reduce the dimensionality. In this work, we apply a filter method before the classification and include a discretization step. The results obtained over ten different microarray data sets confirm the adequacy of the proposed method, that achieves better performances than the classifier alone. Besides, the combination method is also compared with the approaches of other authors (using wrappers and filters), outperforming the prediction accuracy and maintaining or even decreasing the number of genes required.
  • Keywords
    DNA; biology computing; information filtering; lab-on-a-chip; learning (artificial intelligence); pattern classification; DNA microarray data set; feature selection methods; filter method; gene expression; gene selection discretization; machine learning; Accuracy; Cancer; Entropy; Machine learning; Niobium; Prediction algorithms; Training;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Neural Networks (IJCNN), The 2010 International Joint Conference on
  • Conference_Location
    Barcelona
  • ISSN
    1098-7576
  • Print_ISBN
    978-1-4244-6916-1
  • Type

    conf

  • DOI
    10.1109/IJCNN.2010.5596825
  • Filename
    5596825