DocumentCode
2539720
Title
Predicting RNA secondary structure with Tabu Search
Author
Liu, Yongguo ; Hao, Jianrui ; Peng, Jun
Author_Institution
Sch. of Comput. Sci. & Eng., Univ. of Electron. Sci. & Technol. of China, Chengdu, China
fYear
2010
fDate
7-9 July 2010
Firstpage
409
Lastpage
414
Abstract
In this paper, a novel method for predicting RNA secondary structure called RNA secondary structure prediction based on Tabu Search (RNATS) is proposed. In RNATS, two search models, intensification search and diversification search, are designed to exploit the local regions around the current solution and explore the unvisited space, respectively. Simulation experiments are conducted for six RNA sequences to show that the proposed method is feasible and effective.
Keywords
biology computing; molecular biophysics; molecular configurations; organic compounds; RNA secondary structure; RNA sequences; Tabu search; current solution; diversification search; intensification search; Computer simulation; Laboratories; Neodymium; Nickel; RNA; Space exploration; RNA secondary structure prediction; minimum free energy; tabu search;
fLanguage
English
Publisher
ieee
Conference_Titel
Cognitive Informatics (ICCI), 2010 9th IEEE International Conference on
Conference_Location
Beijing
Print_ISBN
978-1-4244-8041-8
Type
conf
DOI
10.1109/COGINF.2010.5599703
Filename
5599703
Link To Document