DocumentCode :
2589563
Title :
A correlational Bayesian network for DNA microarray data analysis
Author :
Piao, Haiyan
Author_Institution :
Sch. of Comput. Eng., Nanyang Technol. Univ., Singapore, Singapore
Volume :
3
fYear :
2011
fDate :
15-17 Oct. 2011
Firstpage :
1702
Lastpage :
1705
Abstract :
From DNA microarray experiments, we need to deal with large datasets in which instances are described by many features. In order to reduce high data dimensionality, feature selection method (FSMs) is usually applied in the flow of data analysis. In this paper, we propose a correlational Bayesian network for feature selection. The proposed algorithm is able to effectively identify and manipulate correlational individuals so that it improves performance and provides higher accurate results than other Bayesian network learning and FSMs. Through use of Bayesian framework to infer the weights, weight decay terms and perform model selection, we can obtain neural models with high generalization capability and low complexity. As a classifier Backpropagation network is used for classification of cancer types. The experiments are carried out for verification of the proposed method. A comparison study is also done with conventional Bayesian network approach and other FSMs. From comparison it can be seen that the correlational Bayesian network (CBN) proposed in thia paper is effective.
Keywords :
Bayes methods; DNA; backpropagation; cancer; data analysis; data reduction; feature extraction; medical computing; neural nets; Bayesian network learning; DNA microarray data analysis; DNA microarray experiments; FSM; cancer types; classifier backpropagation network; correlational Bayesian network; data dimensionality reduction; feature selection method; neural models; Accuracy; Bayesian methods; Cancer; Correlation; Gene expression; Neurons; Probability distribution;
fLanguage :
English
Publisher :
ieee
Conference_Titel :
Biomedical Engineering and Informatics (BMEI), 2011 4th International Conference on
Conference_Location :
Shanghai
Print_ISBN :
978-1-4244-9351-7
Type :
conf
DOI :
10.1109/BMEI.2011.6098636
Filename :
6098636
Link To Document :
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