DocumentCode
2589563
Title
A correlational Bayesian network for DNA microarray data analysis
Author
Piao, Haiyan
Author_Institution
Sch. of Comput. Eng., Nanyang Technol. Univ., Singapore, Singapore
Volume
3
fYear
2011
fDate
15-17 Oct. 2011
Firstpage
1702
Lastpage
1705
Abstract
From DNA microarray experiments, we need to deal with large datasets in which instances are described by many features. In order to reduce high data dimensionality, feature selection method (FSMs) is usually applied in the flow of data analysis. In this paper, we propose a correlational Bayesian network for feature selection. The proposed algorithm is able to effectively identify and manipulate correlational individuals so that it improves performance and provides higher accurate results than other Bayesian network learning and FSMs. Through use of Bayesian framework to infer the weights, weight decay terms and perform model selection, we can obtain neural models with high generalization capability and low complexity. As a classifier Backpropagation network is used for classification of cancer types. The experiments are carried out for verification of the proposed method. A comparison study is also done with conventional Bayesian network approach and other FSMs. From comparison it can be seen that the correlational Bayesian network (CBN) proposed in thia paper is effective.
Keywords
Bayes methods; DNA; backpropagation; cancer; data analysis; data reduction; feature extraction; medical computing; neural nets; Bayesian network learning; DNA microarray data analysis; DNA microarray experiments; FSM; cancer types; classifier backpropagation network; correlational Bayesian network; data dimensionality reduction; feature selection method; neural models; Accuracy; Bayesian methods; Cancer; Correlation; Gene expression; Neurons; Probability distribution;
fLanguage
English
Publisher
ieee
Conference_Titel
Biomedical Engineering and Informatics (BMEI), 2011 4th International Conference on
Conference_Location
Shanghai
Print_ISBN
978-1-4244-9351-7
Type
conf
DOI
10.1109/BMEI.2011.6098636
Filename
6098636
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