• DocumentCode
    2589563
  • Title

    A correlational Bayesian network for DNA microarray data analysis

  • Author

    Piao, Haiyan

  • Author_Institution
    Sch. of Comput. Eng., Nanyang Technol. Univ., Singapore, Singapore
  • Volume
    3
  • fYear
    2011
  • fDate
    15-17 Oct. 2011
  • Firstpage
    1702
  • Lastpage
    1705
  • Abstract
    From DNA microarray experiments, we need to deal with large datasets in which instances are described by many features. In order to reduce high data dimensionality, feature selection method (FSMs) is usually applied in the flow of data analysis. In this paper, we propose a correlational Bayesian network for feature selection. The proposed algorithm is able to effectively identify and manipulate correlational individuals so that it improves performance and provides higher accurate results than other Bayesian network learning and FSMs. Through use of Bayesian framework to infer the weights, weight decay terms and perform model selection, we can obtain neural models with high generalization capability and low complexity. As a classifier Backpropagation network is used for classification of cancer types. The experiments are carried out for verification of the proposed method. A comparison study is also done with conventional Bayesian network approach and other FSMs. From comparison it can be seen that the correlational Bayesian network (CBN) proposed in thia paper is effective.
  • Keywords
    Bayes methods; DNA; backpropagation; cancer; data analysis; data reduction; feature extraction; medical computing; neural nets; Bayesian network learning; DNA microarray data analysis; DNA microarray experiments; FSM; cancer types; classifier backpropagation network; correlational Bayesian network; data dimensionality reduction; feature selection method; neural models; Accuracy; Bayesian methods; Cancer; Correlation; Gene expression; Neurons; Probability distribution;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Biomedical Engineering and Informatics (BMEI), 2011 4th International Conference on
  • Conference_Location
    Shanghai
  • Print_ISBN
    978-1-4244-9351-7
  • Type

    conf

  • DOI
    10.1109/BMEI.2011.6098636
  • Filename
    6098636