• DocumentCode
    260239
  • Title

    The improvement of accuracy of gene expression data classification with gene ontology

  • Author

    Qofrani, Elnaz ; Jalali, Mehrdad ; Kalani, Mohamad Reza

  • Author_Institution
    Imam Reza Int. Univ., Mashhad, Iran
  • fYear
    2014
  • fDate
    26-27 Nov. 2014
  • Firstpage
    1
  • Lastpage
    5
  • Abstract
    Gene selection is one of important research issues in analysis of gene expression data classification. Current methods try to reduce genes by means of statistical calculations and have used semantic similarity under gene ontology. In this article a technique has been presented based on which in addition to considering biological relation among genes, redundant genes by means of hierarchical clustering are omitted and the accuracy of classification increases. The structure and function of this technique have also been explained. The experiments using a single real data set indicate that the proposed technique in addition to selecting fewer genes, have higher accuracy of classification (Loocv), comparing to the technique that is based on semantic similarity.
  • Keywords
    biology computing; genetics; ontologies (artificial intelligence); biological relation; gene expression data classification; gene ontology; gene selection; hierarchical clustering; semantic similarity; statistical calculation; Accuracy; Classification algorithms; Clustering algorithms; Correlation; Gene expression; Ontologies; Semantics; Classification of Gene Expression Data; Gene Selection; Ontology; Semantic Similarity;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Technology, Communication and Knowledge (ICTCK), 2014 International Congress on
  • Conference_Location
    Mashhad
  • Type

    conf

  • DOI
    10.1109/ICTCK.2014.7033532
  • Filename
    7033532