DocumentCode
260239
Title
The improvement of accuracy of gene expression data classification with gene ontology
Author
Qofrani, Elnaz ; Jalali, Mehrdad ; Kalani, Mohamad Reza
Author_Institution
Imam Reza Int. Univ., Mashhad, Iran
fYear
2014
fDate
26-27 Nov. 2014
Firstpage
1
Lastpage
5
Abstract
Gene selection is one of important research issues in analysis of gene expression data classification. Current methods try to reduce genes by means of statistical calculations and have used semantic similarity under gene ontology. In this article a technique has been presented based on which in addition to considering biological relation among genes, redundant genes by means of hierarchical clustering are omitted and the accuracy of classification increases. The structure and function of this technique have also been explained. The experiments using a single real data set indicate that the proposed technique in addition to selecting fewer genes, have higher accuracy of classification (Loocv), comparing to the technique that is based on semantic similarity.
Keywords
biology computing; genetics; ontologies (artificial intelligence); biological relation; gene expression data classification; gene ontology; gene selection; hierarchical clustering; semantic similarity; statistical calculation; Accuracy; Classification algorithms; Clustering algorithms; Correlation; Gene expression; Ontologies; Semantics; Classification of Gene Expression Data; Gene Selection; Ontology; Semantic Similarity;
fLanguage
English
Publisher
ieee
Conference_Titel
Technology, Communication and Knowledge (ICTCK), 2014 International Congress on
Conference_Location
Mashhad
Type
conf
DOI
10.1109/ICTCK.2014.7033532
Filename
7033532
Link To Document