DocumentCode
2809767
Title
Tunable tensor voting for regularizing punctate patterns of membrane-bound protein signals
Author
Loss, Leandro A. ; Bebis, George ; Parvin, Bahram
Author_Institution
Lawrence Berkeley Nat. Lab., Berkeley, CA, USA
fYear
2009
fDate
June 28 2009-July 1 2009
Firstpage
1378
Lastpage
1381
Abstract
Membrane-bound protein, expressed in the basal-lateral region, is heterogeneous and an important endpoint for understanding biological processes. At the optical resolution, membrane-bound protein can be visualized as being diffused (e.g., E-cadherin), punctate (e.g., connexin), or simultaneously diffused and punctate as a result of sample preparation or conditioning. Furthermore, there is a significant amount of heterogeneity as a result of technical and biological variations. This paper aims at enhancing membrane-bound proteins that are expressed between epithelial cells so that quantitative analysis can be enabled on a cell-by-cell basis. We propose a method to detect and enhance membrane-bound protein signal from noisy images. More precisely, we build upon the tensor voting framework in order to produce an efficient method to detect and refine perceptually interesting linear structures in images. The novelty of the proposed method is in its iterative tuning of the tensor voting fields, which allows the concentration of the votes only over areas of interest. The method is shown to produce high quality enhancements of membrane-bound protein signals with combined punctate and diffused characteristics. Experimental results demonstrate the benefits of using tunable tensor voting for enhancing and differentiating cell-cell adhesion mediated by integral cell membrane protein.
Keywords
biomembranes; cellular biophysics; image segmentation; medical image processing; proteins; tensors; E cadherin; basal-lateral region; cell-cell adhesion; connexin; epithelial cells; integral cell membrane protein; membrane-bound protein signals; punctate pattern regularization; quantitative analysis; sample preparation; tunable tensor voting; Adhesives; Biological processes; Biomedical optical imaging; Iterative methods; Proteins; Refining; Signal resolution; Tensile stress; Visualization; Voting; Perceptual grouping; membrane-bound protein; segmentation;
fLanguage
English
Publisher
ieee
Conference_Titel
Biomedical Imaging: From Nano to Macro, 2009. ISBI '09. IEEE International Symposium on
Conference_Location
Boston, MA
ISSN
1945-7928
Print_ISBN
978-1-4244-3931-7
Electronic_ISBN
1945-7928
Type
conf
DOI
10.1109/ISBI.2009.5193322
Filename
5193322
Link To Document