• DocumentCode
    2944779
  • Title

    Compressed Index for Property Matching

  • Author

    Zhao, Hua ; Lu, Songfeng

  • Author_Institution
    Sch. of Comput. Sci. & Technol., Huazhong Univ. of Sci. & Technol., Wuhan, China
  • fYear
    2011
  • fDate
    29-31 March 2011
  • Firstpage
    133
  • Lastpage
    142
  • Abstract
    In this paper, we revisit the Property Matching problem and present a better indexing scheme for the problem. Let T be a text of length n with property p, and P be a pattern of length m, both strings are over a fixed finite alphabet. In particular, the existing data structures all require O(n log n)-bit space, where n is the length of the text. By using compressed suffix array and other supporting data structures, we propose a new index structure for the problem. We discuss the index structure and searching process for the case |π| = O(n/ log n) and |π| = Ω(n/ log n). Our index only needs nHk(T)+O(n log |Σ|)-bits and nHk(T)+nH0(A)+O(n(log |Σ|+log log n)) bits space for the above cases respectively (A is an array with length n here), while needing a little more searching time as return.
  • Keywords
    computational complexity; data structures; string matching; text analysis; O(n log n) complexity; compressed suffix array; data structure; fixed finite alphabet; pattern length; property matching problem; string matching; text length; Arrays; Bioinformatics; Complexity theory; Indexing; Pattern matching;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Data Compression Conference (DCC), 2011
  • Conference_Location
    Snowbird, UT
  • ISSN
    1068-0314
  • Print_ISBN
    978-1-61284-279-0
  • Type

    conf

  • DOI
    10.1109/DCC.2011.20
  • Filename
    5749471