DocumentCode
3133684
Title
Sample Scale-Free Gene Regulatory Network Using Gene Ontology
Author
Chen, Guanrao ; Larsen, Peter ; Almasri, Eyad ; Dai, Yang
Author_Institution
Dept. of Comput. Sci., Illinois Univ., Chicago, IL
fYear
2006
fDate
Aug. 30 2006-Sept. 3 2006
Firstpage
5523
Lastpage
5526
Abstract
Currently there are various approaches to the reconstruction of gene regulatory networks from different sources of data. However, none of these methods incorporates explicitly scale-free property, one of the most important features of the targeted network, into their algorithms. In this paper, several network sampling strategies are explored on a set assembled from previous published gene interactions in yeast, expecting to reconstruct regulatory networks that are scale-free
Keywords
biology computing; genetics; microorganisms; molecular biophysics; ontologies (artificial intelligence); sampling methods; gene interactions; gene ontology; network reconstruction model; network sampling algorithm; scale-free gene regulatory network; yeast; Assembly; Bioinformatics; Cities and towns; Frequency; Fungi; Ontologies; Proteins; Sampling methods; Testing; USA Councils;
fLanguage
English
Publisher
ieee
Conference_Titel
Engineering in Medicine and Biology Society, 2006. EMBS '06. 28th Annual International Conference of the IEEE
Conference_Location
New York, NY
ISSN
1557-170X
Print_ISBN
1-4244-0032-5
Electronic_ISBN
1557-170X
Type
conf
DOI
10.1109/IEMBS.2006.259261
Filename
4463056
Link To Document