• DocumentCode
    3133684
  • Title

    Sample Scale-Free Gene Regulatory Network Using Gene Ontology

  • Author

    Chen, Guanrao ; Larsen, Peter ; Almasri, Eyad ; Dai, Yang

  • Author_Institution
    Dept. of Comput. Sci., Illinois Univ., Chicago, IL
  • fYear
    2006
  • fDate
    Aug. 30 2006-Sept. 3 2006
  • Firstpage
    5523
  • Lastpage
    5526
  • Abstract
    Currently there are various approaches to the reconstruction of gene regulatory networks from different sources of data. However, none of these methods incorporates explicitly scale-free property, one of the most important features of the targeted network, into their algorithms. In this paper, several network sampling strategies are explored on a set assembled from previous published gene interactions in yeast, expecting to reconstruct regulatory networks that are scale-free
  • Keywords
    biology computing; genetics; microorganisms; molecular biophysics; ontologies (artificial intelligence); sampling methods; gene interactions; gene ontology; network reconstruction model; network sampling algorithm; scale-free gene regulatory network; yeast; Assembly; Bioinformatics; Cities and towns; Frequency; Fungi; Ontologies; Proteins; Sampling methods; Testing; USA Councils;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Engineering in Medicine and Biology Society, 2006. EMBS '06. 28th Annual International Conference of the IEEE
  • Conference_Location
    New York, NY
  • ISSN
    1557-170X
  • Print_ISBN
    1-4244-0032-5
  • Electronic_ISBN
    1557-170X
  • Type

    conf

  • DOI
    10.1109/IEMBS.2006.259261
  • Filename
    4463056