Title :
Microarray Images Processing Using the Offset Vector Field and Expectation Maximization Algorithm
Author :
Weng Guirong ; Su Jian
Author_Institution :
Sch. of Mechanic & Electron. Eng., Soochow Univ., Suzhou, China
Abstract :
DNA microarrays provide a simple tool to identify and quantify the gene expression for tens of thousands of genes simultaneously. Image processing is an important step in microarrays experiments. This paper presents a novel technique for removing gene´s noises based on the offset vector field and segmenting genes using the expectation maximization algorithm. Simulations show that the new technique for microarray images filtering and segmentation has better performance than most of the common ways. The results of experiments are computationally attractive, have excellent performance and can preserve spots´ data while efficiently suppress noises.
Keywords :
expectation-maximisation algorithm; genetics; image segmentation; lab-on-a-chip; medical image processing; DNA microarrays; expectation maximization algorithm; gene expression; gene noises; microarray image filtering; microarray image processing; offset vector field; segmenting genes; Computational modeling; DNA; Filtering; Gene expression; Image processing; Image segmentation; Iterative algorithms; Noise shaping; Pollution; Sequences;
Conference_Titel :
Bioinformatics and Biomedical Engineering (iCBBE), 2010 4th International Conference on
Conference_Location :
Chengdu
Print_ISBN :
978-1-4244-4712-1
Electronic_ISBN :
2151-7614
DOI :
10.1109/ICBBE.2010.5517774