Title :
Finding stable conformations of small molecules using real coded genetic algorithm
Author :
Shashi ; Deep, Kusum ; Katiyar, V.K.
Author_Institution :
Dept. of Math., Indian Inst. of Technol., Roorkee, Roorkee, India
Abstract :
In this paper we have used a real coded genetic algorithm for finding the global minimum energy conformation of two small molecules viz. Pseudoethane and 1,2,3-trichloro-l-fluoro-propane based on a potential function. Finding the global minimum of this function is very difficult because it has a large number of local minima, which grows exponentially with molecule size. Computational results are obtained using a real-coded genetic algorithm. The obtained results show a remarkable performance as compared to the earlier published results.
Keywords :
genetic algorithms; molecular configurations; organic compounds; potential energy functions; 1,2,3-trichloro-1-fluoro-propane; global minimum energy conformation; potential energy function; pseudoethane; real coded genetic algorithm; small molecules; Bonding; Genetic algorithms; Mathematics; Minimization methods; Niobium; Optimization methods; Potential energy; Simulated annealing; Smoothing methods; Testing; genetic algorithm; global minima; molecular conformation; potential energy function;
Conference_Titel :
Nature & Biologically Inspired Computing, 2009. NaBIC 2009. World Congress on
Conference_Location :
Coimbatore
Print_ISBN :
978-1-4244-5053-4
DOI :
10.1109/NABIC.2009.5393748