Title :
Identifying histological concepts on basal cell carcinoma images using nuclei based sampling and multi-scale descriptors
Author :
Romo-Bucheli, David ; Moncayo, Ricardo ; Cruz-Roa, Angel ; Romero, Eduardo
Author_Institution :
CIM@Lab. Res. Group, Univ. Nac. de Colombia, Bogota, Colombia
Abstract :
Histopathological sample examination involves a sequential analysis of several fields of view (FoV) at different magnification levels. Experts integrate this information by implicitly fusing morphometric and spatial features, mainly related with cell appearance, spatial distribution and organization. By performing this analysis a pathologist recognizes several micro structures such as follicle, epidermis, carcinoma and eccrine glands in basal skin tissue samples. In this article we present a new approach to histopathology classification using a multi-scale nuclei descriptor, located at a set of detected nuclei and constructed as a multiresolution pyramid. The method was evaluated in a multiclass challenging problem, i.e, identifying epidermis, hair follicle, eccrine glands and nodular carcinoma in 240 histopathology images of basal cell carcinoma. The experimental results show an average Area Under the ROC Curve (AUC) of 0.93 in a 6-fold cross-validation for the set of four classes.
Keywords :
biomedical optical imaging; cancer; cellular biophysics; feature extraction; image classification; image resolution; image sampling; medical image processing; skin; basal cell carcinoma images; histopathology classification; multiresolution pyramid; multiscale descriptors; multiscale nuclei descriptor; nuclei based sampling; Biomedical imaging; Dictionaries; Epidermis; Feature extraction; Glands; Pathology; Visualization; Histopathology image analysis; bag of features; basal cell carcinoma; multi-scale descriptor; skin cancer;
Conference_Titel :
Biomedical Imaging (ISBI), 2015 IEEE 12th International Symposium on
Conference_Location :
New York, NY
DOI :
10.1109/ISBI.2015.7164041