Title :
Solutions to the phase problem of X-ray crystallography on the Connection Machine CM-2
Author :
Chang, C.-S. ; DeTitta, G. ; Hauptman, H. ; Miller, R. ; Poulin, M. ; Thuman, P. ; Weeks, C.
Author_Institution :
Dept. of Comput. Sci., Buffalo Univ., NY, USA
Abstract :
The authors have developed a formulation of the phase problem of X-ray crystallography in terms of a minimal function of phases and a new minimization algorithm called shake-and-bake for solving this minimal function. The implementation details of the shake-and-bake strategy on the Connection Machine CM-2 are presented. The shake-and-bake algorithm has been used to determine the atomic structure of four test structures, ranging from 28 to 317 atoms. These results indicate that shake-and-bake is effective on structures of this size
Keywords :
X-ray crystallography calculation methods; minimisation; parallel processing; physics computing; Connection Machine CM-2; X-ray crystallography; atomic structure; implementation details; minimal function; minimization algorithm; phase problem; shake-and-bake; Antibiotics; Atomic measurements; Biology; Computer science; Crystallography; Genetic algorithms; Minimization methods; Simulated annealing; Tail; X-ray diffraction;
Conference_Titel :
Frontiers of Massively Parallel Computation, 1992., Fourth Symposium on the
Conference_Location :
McLean, VA
Print_ISBN :
0-8186-2772-7
DOI :
10.1109/FMPC.1992.234868