DocumentCode
3311178
Title
Free energy periodicity in E.coli
Author
Rosnick, David I. ; Bitzer, Donald L. ; Vouk, Mladen A. ; May, Elebeoba E.
Author_Institution
Dept. of Comput. Sci., North Carolina State Univ., Raleigh, NC, USA
Volume
2
fYear
1999
fDate
36434
Abstract
It has been seen that sequences upstream from coding regions tend to possess significant complementarity to the exposed part of the 16S rRNA in E.coli. While upstream binding between the Shine-Dalgarno sequence and the mRNA may be a necessary condition for translation, it appears to be insufficient. By computing the free energy binding within the coding sequence, it is suggested that the 16S has a continuing role through elongation of translation as well
Keywords
cellular biophysics; free energy; microorganisms; 16S rRNA; E.coli; Shine-Dalgarno sequence; coding regions; coding sequence; free energy periodicity; translation elongation; upstream binding; Bioinformatics; Computer science; DNA computing; Data analysis; Data visualization; Databases; Genomics; Sequences; Signal analysis; Sun;
fLanguage
English
Publisher
ieee
Conference_Titel
[Engineering in Medicine and Biology, 1999. 21st Annual Conference and the 1999 Annual Fall Meetring of the Biomedical Engineering Society] BMES/EMBS Conference, 1999. Proceedings of the First Joint
Conference_Location
Atlanta, GA
ISSN
1094-687X
Print_ISBN
0-7803-5674-8
Type
conf
DOI
10.1109/IEMBS.1999.804382
Filename
804382
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